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Single Cell Spatial Transcriptomics Jobs in Brooklyn, NY

Msk

Senior Research Technician, SAIL

New York, NY · On-site

$32.10 - $49.79/hr

A driving motivation of the Single-cell Analytics Innovation Lab (SAIL) at MSKCC is to develop cutting-edge single-cell and spatial genomics experimental technologies, including single-cell genomics ...

Mount Sinai Hospital

Postdoctoral Fellow-MSH

Manhattan, NY · On-site

$53K - $73K/yr

To do that, we leverage high-throughput functional immunoassays with single cell proteogenomic ... analyze genomics/transcriptomics/proteomics data • Develop and implement algorithms ...

New York University

Post Doctorate Associate

New York, NY · On-site

$65K - $70K/yr

... stem cell culture, and single-cell profiling. (3) Obtain opportunities for fellowship support ... (4) Transcriptomics or Systems Biology, as exemplified by a strong publication record and ...

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How much do single cell spatial transcriptomics jobs pay per hour?

As of Jul 17, 2026, the average hourly pay for single cell spatial transcriptomics in Brooklyn, NY is $22.76, according to ZipRecruiter salary data. Most workers in this role earn between $17.69 and $28.56 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Single Cell Spatial Transcriptomics Scientist, and why are they important?

To thrive as a Single Cell Spatial Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree (PhD or MSc) in a relevant field. Familiarity with high-throughput sequencing platforms, spatial transcriptomics technologies (like 10x Genomics Visium or NanoString GeoMx), and data analysis tools such as R or Python is essential. Critical thinking, problem-solving, and effective communication are crucial soft skills for interpreting complex data and collaborating in multidisciplinary teams. These skills and qualities are vital for generating reliable insights into cellular function and spatial organization, which drive innovative research and discovery.

What are some typical challenges faced by professionals working in Single Cell Spatial Transcriptomics, and how can they be addressed?

Professionals in Single Cell Spatial Transcriptomics often encounter challenges related to handling large, complex data sets and integrating spatial information with single-cell transcriptomic profiles. These tasks demand strong computational skills and close collaboration with bioinformaticians and other researchers. Effective communication within interdisciplinary teams is essential to ensure experimental design aligns with downstream analysis needs. Staying updated with rapidly evolving technologies and best practices also helps professionals overcome technical hurdles and produce reliable, high-impact results.

What is single cell spatial transcriptomics?

Single cell spatial transcriptomics is a cutting-edge technique that allows researchers to analyze gene expression in individual cells while preserving their spatial location within a tissue. This method combines the high-resolution insights of single-cell RNA sequencing with spatial information, enabling scientists to understand how cells interact and organize within their native environments. It is widely used in biomedical research to study tissue architecture, disease mechanisms, and cellular heterogeneity.
What are popular job titles related to Single Cell Spatial Transcriptomics jobs in Brooklyn, NY? For Single Cell Spatial Transcriptomics jobs in Brooklyn, NY, the most frequently searched job titles are:
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What cities near Brooklyn, NY are hiring for Single Cell Spatial Transcriptomics jobs? Cities near Brooklyn, NY with the most Single Cell Spatial Transcriptomics job openings:
Single Cell Spatial Transcriptomics jobs near you
Infographic showing various Single Cell Spatial Transcriptomics job openings in Brooklyn, NY as of July 2026, with employment types broken down into 100% Full Time. Highlights an 83% In-person, and 17% Remote job distribution, with an average salary of $47,340 per year, or $22.8 per hour.
Research Technician C

Research Technician C

Albert Einstein College of Medicine

Bronx, NY • On-site

$31.95/hr

Full-time

Re-posted 11 days ago

Job description

About Us
The Institute for Brain Disorders and Neural Regeneration of the Albert Einstein College of Medicine and the Laboratory of Stem Cell Biology and Epigenomic and Regenerative Medicine of Dr. Mark F. Mehler is seeking a Research Technician C depending on qualifications. Our laboratory group has a special interest in the developmental pathogenesis of neurodegenerative diseases, with a focus on Huntington's disease (HD), and the novel early molecular, cellular, and systems-level impairments that predispose to degenerative dementia during later life with a focus on cutting edge therapeutic initiatives to identify previously unanticipated epigenetic and regenerative target processes that may be more effective when employed during the pre-manifest stage of disease.
POSITION RESPONSIBILITIES
Selected applicants will be expected to:
  • Perform animal husbandry, including ear ID tagging, tissue processing for genotyping, mating schedules, colony surveillance, including IACUC mandated monthly screenings based on Body Conditioning Scoring Tests, mice separation and tracking, data input and maintenance of mouse colony software, euthanasia of surplus or sick mice. These activities include initial setting up of animal colonies, generation of mouse breeders, and colony expansion.
  • Compliance with IACUC Environmental and Biohazard policies, handling and tracking of biospecimens between Einstein Core Facilities, database maintenance, reagent ordering and re-stocking, mouse orders, buffer preparation and re-stocking and collaborative support to other research staff involved in this grant.
  • Perform tissue processing, immunofluorescence microscopy and ultrastructural analysis, stereological examination.
  • Assist in performing neurobehavioral testing procedures.
  • Assist in allograft preparation for transplantation analyses, optogenetic protocols, molecular techniques including single cell RNA-seq, histone occupancy, ChIP-seq, spatial transcriptomics, examination for the molecular architecture of trinucleotide repeat expansion and SNPs of targeted DNA repair genes.
  • Assist in protocols for generation of IPSCs and use of neural organoid techniques.

The person will:
  • Perform a moderate number of simple or moderate technical procedures;
  • Require only infrequent guidance;
  • Frequently be responsible for ordering supplies;
  • Occasionally be responsible for requesting quotes and information for purchasing equipment for the laboratory;
  • Occasionally modify technical procedures;
  • Occasionally train or guide other lab members;
  • May occasionally operate, maintain and troubleshoot complex, high tech equipment;*
  • May modify experimental protocols;
  • Occasionally analyze and interpret data;
  • May occasionally make written contributions to papers and grant proposals;*
  • An understanding of moderately complex scientific literature and moderate understanding of research goals and rationale is required.

*May not be applicable.
QUALIFICATIONS
  • Required to have at least a Bachelor's Degree in a related science or equivalent skills or experience, and two to four and one half years of related experience.
  • Strong scientific training background, knowledge of biostatistical programs and excellent writing skills preferred.

Additional Information
In compliance with NYC's Pay Transparency Act, the hourly rates for this are listed below. This rate is based on the 1199 bargaining unit contract.
Hiring Rate
31.94
Post Probationary Rate
32.48
Job Rate
33.83
Maximum Salary Range
USD $31.95/Hr.

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