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Senior Computer Science Bioinformatics Jobs in New York

NYULMC

Senior Bioinformatics Programmer

New York, NY · On-site

Position Summary: We have an exciting opportunity to join our team as a Sr. Bioinformatics ... Sc. plus a minimum of 3 years' experience in Bioinformatics, Computer Science, Programming ...

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Senior Computer Science Bioinformatics information

What are the key skills and qualifications needed to thrive as a senior computer science bioinformatics professional?

To thrive as a Senior Computer Science Bioinformatics professional, you need advanced knowledge in computational biology, programming (such as Python, R, or Java), and a strong background in molecular biology or genomics, often supported by a graduate degree (MSc or PhD). Proficiency with bioinformatics tools (like BLAST, GATK, or Bioconductor), high-performance computing environments, and version control systems (e.g., Git) is essential. Strong problem-solving abilities, analytical thinking, and effective collaboration skills set top performers apart in this field. These competencies are crucial for managing complex biological datasets, developing innovative algorithms, and driving impactful research in interdisciplinary teams.

How does a senior computer science bioinformatics professional typically collaborate with multidisciplinary teams?

Senior Computer Science Bioinformatics professionals often work closely with biologists, clinicians, statisticians, and software engineers to analyze complex biological datasets. They are responsible for translating biological questions into computational problems, developing algorithms or pipelines, and ensuring that results are accurate and actionable. Effective communication and collaboration are essential, as they must bridge the gap between technical and scientific teams, lead project discussions, and sometimes mentor junior team members. This collaborative environment fosters innovation and helps drive research projects or clinical applications forward.

What does a senior computer science bioinformatics professional do?

A Senior Computer Science Bioinformatics professional applies advanced computational methods and software development techniques to analyze biological data, such as DNA, RNA, and protein sequences. They design and implement algorithms, manage large datasets, and collaborate with biologists to interpret results for research or clinical purposes. Their work often supports discoveries in genomics, drug development, and personalized medicine. In addition to technical expertise, they may lead teams, mentor junior staff, and oversee complex projects.
What are the most commonly searched types of Computer Science Bioinformatics jobs in New York? The most popular types of Computer Science Bioinformatics jobs in New York are:
What cities in New York are hiring for Senior Computer Science Bioinformatics jobs? Cities in New York with the most Senior Computer Science Bioinformatics job openings:
Senior Computer Science Bioinformatics jobs near you

Senior Bioinformatics Analyst (AI/ML for Genomics) | Bioinformatics Resource Center

The Rockefeller University

Manhattan, NY • On-site

Full-time

Re-posted 14 days ago

Job description

Job Summary:
The Rockefeller University is a leading research institution, and they are seeking a Senior Bioinformatics Analyst to design, implement, and deploy AI/ML methods for genomics and multi-omics data. This role focuses on creating robust analytical pipelines that support research across the university's laboratories and providing consultative support and training to researchers.
Responsibilities:
• Design, implement, and maintain AI/ML pipelines for genomics and multi-omics data (RNA-seq, ATAC-seq, ChIP-seq, functional genomics)
• Apply and adapt machine learning and deep learning models (e.g., convolutional and transformer-based architectures) to biological questions in collaboration with investigators.
• Develop interpretable models and attribution analyses (e.g., motif discovery, perturbation and variant-effect analyses) to support biological insight.
• Build, document, and containerize reproducible workflows suitable for shared HPC/GPU environments.
• Provide consultative support and training to researchers using BRC AI/ML tools and pipelines.
• Performs related duties & responsibilities as assigned/requested.
Qualifications:
Required:
• Master’s degree in Bioinformatics, Computational Biology, Computer Science, or a related field
• A minimum of five years of relevant experience applying computational or machine learning methods to biological data.
Preferred:
• PhD in Bioinformatics, Computational Biology, Computer Science, or a related field
• Experience applying deep learning or foundation-model approaches to sequence-based or multimodal genomics data.
• Experience in a core facility or highly collaborative research environment.
• Familiarity with model interpretability for biological insight (motif analysis, attribution methods, TF/RBP modeling).
• Experience working with HPC/GPU resources and job schedulers (e.g., Slurm) and/or cloud-based deployments.
• Track record of contributing to peer-reviewed publications as a computational specialist.
• Interest in mentoring and training researchers in applied AI/ML methods.
Company:
The Rockefeller University is a center for research and graduate education in biomedical sciences, chemistry, bioinformatics, and physics. Founded in 1901, the company is headquartered in New York, USA, with a team of 1001-5000 employees. The company is currently Late Stage.

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