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Program Controls Manager Jobs in San Diego, CA (NOW HIRING)

STV is seeking a highly organized and experienced Document Controls Manager to support major capital improvement and public infrastructure programs throughout California. This position will be ...

Partner with Program Managers to develop, implement, and manage program controls strategies, processes, and delivery objectives. * Manage and coordinate cost management services including capital ...

Partner with Program Managers to develop, implement, and manage program controls strategies, processes, and delivery objectives. * Manage and coordinate cost management services including capital ...

Partner with Program Managers to develop, implement, and manage program controls strategies, processes, and delivery objectives. * Manage and coordinate cost management services including capital ...

Partner with Program Managers to develop, implement, and manage program controls strategies, processes, and delivery objectives. * Manage and coordinate cost management services including capital ...

Partner with Program Managers to develop, implement, and manage program controls strategies, processes, and delivery objectives. * Manage and coordinate cost management services including capital ...

Partner with Program Managers to develop, implement, and manage program controls strategies, processes, and delivery objectives. * Manage and coordinate cost management services including capital ...

Partner with Program Managers to develop, implement, and manage program controls strategies, processes, and delivery objectives. * Manage and coordinate cost management services including capital ...

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Program Controls Manager information

See San Diego, CA salary details

$82.8K

$141.9K

$181K

How much do program controls manager jobs pay per year?

As of Aug 26, 2026, the average yearly pay for program controls manager in San Diego, CA is $141,907.00, according to ZipRecruiter salary data. Most workers in this role earn between $107,200.00 and $180,500.00 per year, depending on experience, location, and employer.

What is a program controls manager?

Program Controls Managers are professionals responsible for overseeing the planning, monitoring, and controlling of project schedules, budgets, and resources within large programs. They ensure that all aspects of a program align with organizational objectives, identify and mitigate risks, and provide regular performance reports to stakeholders. Their role often involves coordinating with project managers, finance teams, and executives to maintain effective program governance and deliver successful outcomes.

How does a program controls manager typically collaborate with project managers and stakeholders to ensure project success?

A Program Controls Manager works closely with project managers, financial analysts, and key stakeholders to establish baseline schedules, monitor progress, and manage budgets. They facilitate regular meetings to review project performance, identify risks, and implement corrective actions. Clear communication and the ability to interpret complex data are essential, as the role often involves translating technical and financial information into actionable insights for various teams. This collaborative approach helps ensure that projects stay on track and meet organizational objectives.

What are the key skills and qualifications needed to thrive as a program controls manager, and why are they important?

To thrive as a Program Controls Manager, you need expertise in project management, cost control, scheduling, and risk analysis, typically supported by a degree in engineering, construction management, or a related field. Familiarity with project management software like Primavera P6, Microsoft Project, and earned value management systems, as well as certifications such as PMP or CCP, are highly valued. Strong analytical thinking, attention to detail, and effective communication skills enable successful coordination with stakeholders and teams. These abilities are crucial for ensuring projects are delivered on time, within budget, and according to scope and quality standards.

What is the difference between Program Controls Manager vs Project Controls Specialist?

AspectProgram Controls ManagerProject Controls Specialist
CredentialsTypically requires a bachelor’s degree in engineering, finance, or related field; PMP or similar certifications are commonSimilar credentials, often with project management or scheduling certifications
Work EnvironmentOversees multiple projects within a program, often in industries like construction, engineering, or ITFocuses on individual projects, providing scheduling, cost control, and reporting
Employer & Industry UsageUsed by large organizations managing multiple projects or programsCommon in construction, engineering, and IT sectors for project-level control

The Program Controls Manager oversees multiple projects within a program, focusing on strategic coordination and overall control. In contrast, the Project Controls Specialist concentrates on specific projects, handling detailed scheduling, cost management, and reporting. Both roles require similar credentials but differ in scope and level of responsibility.

What cities near San Diego, CA are hiring for Program Controls Manager jobs?

Cities near San Diego, CA with the most Program Controls Manager job openings:

Infographic showing various Program Controls Manager job openings in San Diego, CA as of July 2026, with employment types broken down into 100% Full Time. Highlights an 67% In-person, and 33% Remote job distribution, with an average salary of $141,907 per year, or $68.2 per hour.

Program Controls Analyst

Voyager Technologies, Inc.

San Diego, CA • On-site, Remote

Full-time

Medical, Dental, Vision, Retirement

This job post has expired today. Applications are no longer accepted.


Job description

Voyager is an innovative space, defense, and national security technology company committed to advancing and delivering transformative, mission-critical solutions. We tackle the most complex challenges to unlock new frontiers for human progress, fortify national security, and protect critical assets to lead in the race for technological and operational superiority from ground to space. 

Forge the Future: Join Voyager Technologies 

The future belongs to those who build it. At Voyager Technologies, we're building technologies that protect lives, expand frontiers and prepare us for what's next. And we're doing that with people who are wired to solve, build, adapt and lead. These roles are not for the faint of heart. 

You'll help lay the foundation for humanity's future. Join a culture where innovation thrives, curiosity is rewarded, and impact is real. We're a company of doers, thinkers and builders, united by purpose and grounded in reality. 

If you want to put your skills to work where the stakes are real and the mission is bigger than any one person,forge the future with Voyager. 

The Program Controls Analyst is responsible for ensuring cost-schedule integration, effective program planning, and disciplined execution across a dynamic portfolio of programs. These programs serve DoD, NASA, and commercial customers, encompassing Firm-Fixed Price, Cost-Plus, and commercial contracts, some of which necessitate ANSI/EIA-748-compliant Earned Value Management Systems (EVMS).  In addition to supporting daily program controls and performance management, this role acts as a vital interface with corporate finance, ensuring that program-level financial performance aligns with and supports the overall business. The Program Controls Analyst also helps ensure that program tools, reporting practices, and processes are compatible with and contribute to the organization's broader financial health and planning.

The position reports to the Senior Business Operations Manager and is part of the Business Operations department based in San Diego, CA. This role is remote with preference to onsite in San Diego, CA.

 

In this role, the essential functions are:

  • Develop, maintain, and analyze time-phased cost baselines, actuals, and forecasts in alignment with the program schedule, applying the appropriate level of rigor for each program, whether pure commercial, Firm Fixed Price (FFP), Cost-Plus, or EVMS-compliant.
  • Support the development of Performance Measurement Baselines (PMB) and facilitate Integrated Baseline Reviews (IBRs) where required, tailoring processes to align with contract type, lifecycle phase, and customer expectations.
  • Prepare and analyze program performance metrics using methods appropriate to each program's contractual and operational needs, including BCWS, BCWP, ACWP, variance analysis, and Estimate at Completion (EAC).
  • Collaborate with the Program Controls Scheduler to ensure the cost-schedule integration is effective and efficient, facilitating accurate performance measurement and reporting, including a complete EVMS report where necessary.
  • Interface with corporate finance to align program reporting and forecasting with business objectives and financial planning cycles.
  • Ensure that program-level tools and processes meet the business's financial reporting, forecasting, and control needs.
  • Interface with Program Managers, CAMs, Engineering, Contracts, and Procurement to develop and validate Estimates to Complete (ETC).
  • Monitor, analyze, and report program performance using metrics, KPIs, dashboards, and trend analysis.
  • Support proposal development by preparing cost volumes, BOEs (Basis of Estimate), and schedule and cost planning integration.
  • Support internal and customer-facing reviews, including PMRs, financial reviews, and customer data calls.
  • Contribute to developing and improving cost control processes, reporting standards, and tool integrations.

 

If your experience aligns with our basic qualifications and you are inspired by our mission, we'd like to connect. If you don't see the right role right now, Join Our Talent Community and stay connected as we continue to build what's next.

 

  • Two (2) or more years of experience in program controls, cost analysis, or financial planning within aerospace, defense, or similarly complex technical environments.
  • Bachelor's degree in finance, business administration, or related field.
  • Experience in program cost control, performance measurement, and earned value analysis in aerospace or defense programs.
  • Demonstrated expertise in Earned Value Management (EVM) principles and ANSI/EIA-748 compliance.
  • Familiarity with corporate finance planning cycles, budgeting, and forecasting in a programmatic context.
  • Proficiency in Microsoft Excel, cost reporting tools, and working knowledge of Microsoft Project.

 

Preferred Qualifications:

  • Experience with Deltek Cobra, wInsight, EVMS for Project, or equivalent tools.
  • Familiarity with Enterprise Resource Planning (ERP) systems such as SAP, NetSuite, or Costpoint.
  • Experience interfacing between program-level and enterprise-level finance functions.
  • Familiarity with NASA, DoD, or commercial aerospace program control environments.
  • Understanding of IPMR Formats 1-7, customer reporting requirements, and audit readiness.
  • Ability to lead or support tool integration and process improvement initiatives across cost, schedule, and finance systems.
  • Experience supporting proposal pricing, BOE development, and transition from pursuit to execution.

 

The good faith base salary range for this role is $75,000-$115,000 at the time of this posting. Where you fall within the range depends on your experience, skills, and location. This range reflects base salary only and does not include benefits or bonus/incentive. This range may be adjusted in the future.

 

Voyager offers a highly competitive total compensation package designed to support the well-being, growth, and success of our employees. Employees benefit from a flexible and comprehensive rewards program that supports both professional and personal well-being.  

  • Flexible Time Off (FTO), empowering employees to take the time they need to recharge and maintain a healthy work-life balance
  • Comprehensive medical, dental, and vision coverage for employees and their families, with a significant portion of premiums covered by the company and many benefits paid at 100% for employees
  • Flexible, affordable gym memberships with 12,700+ options nationwide including 24 Hour Fitness, EoS Fitness, Crunch Fitness, Anytime Fitness, Blink Fitness, Chuze Fitness and more! No long term contracts and FREE on-demand workout videos before you enroll
  • 401(k) retirement plan with a 50% company match on contributions up to 8%, supporting long-term financial security
  • Company wellness programs that support physical and mental well-being
  • Additional voluntary benefits and employee support resources
  • The opportunity to work alongside a highly talented team in an innovative, mission driven environment

Voyager is an Equal Opportunity Employer. Employment decisions are made without regard to race, color, religion, national or ethnic origin, sex, sexual orientation, gender identity or expression, age, disability, protected veteran status or other characteristics protected by law. 

To conform to U.S. Government export regulations, including the International Traffic in Arms Regulations (ITAR) (22 CFR Parts 120-130) and the Export Administration Regulations (EAR) (15 CFR Parts 730-774), applicants for this position must be a U.S. Person: a US Citizen, a lawful permanent resident of the U.S., or a protected individual as defined by 8 U.S.C. 1324b(a)(3). Applicants must be eligible to obtain any required export authorizations from the U.S. Department of State or the U.S. Department of Commerce.

Minority/Female/Disabled/Veteran 

The statements contained in this job description are intended to describe the general content and requirements for performance of this job. It is not intended to be an exhaustive list of all job duties, responsibilities, and requirements. This job description is not an employment agreement or contract. Management has the exclusive right to alter the scope of work within the framework of this job description at any time without prior notice.