Familiarity with molecular dynamics simulation concepts (force fields, electrostatics, neighbor lists, periodic boundary conditions) sufficient to engage credibly with both colleagues and the MD ...
Familiarity with molecular dynamics simulation concepts (force fields, electrostatics, neighbor lists, periodic boundary conditions) sufficient to engage credibly with both colleagues and the MD ...
Familiarity with molecular dynamics simulation concepts (force fields, electrostatics, neighbor lists, periodic boundary conditions) sufficient to engage credibly with both colleagues and the MD ...
Familiarity with molecular dynamics simulation concepts (force fields, electrostatics, neighbor lists, periodic boundary conditions) sufficient to engage credibly with both colleagues and the MD ...
Familiarity with molecular dynamics simulation concepts (force fields, electrostatics, neighbor lists, periodic boundary conditions) sufficient to engage credibly with both colleagues and the MD ...
Familiarity with molecular dynamics simulation concepts (force fields, electrostatics, neighbor lists, periodic boundary conditions) sufficient to engage credibly with both colleagues and the MD ...
Molecular Design & DNA Nanotechnology Lead
Emeryville, CA · On-site
$180K - $200K/yr
Use coarse-grained molecular-dynamics simulation (e.g., oxDNA) to predict the mechanism's mechanical behavior - stiffness, compliance, and thermal stability of its motion - and iterate the design.
Molecular Design & DNA Nanotechnology Lead
Emeryville, CA · On-site
$180K - $200K/yr
Use coarse-grained molecular-dynamics simulation (e.g., oxDNA) to predict the mechanism's mechanical behavior - stiffness, compliance, and thermal stability of its motion - and iterate the design.
... dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free energy ... in molecular simulation, including MD, enhanced sampling, and/or free energy methods using tools ...
... dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free energy ... in molecular simulation, including MD, enhanced sampling, and/or free energy methods using tools ...
ML & Molecular Simulation Scientist
San Mateo, CA · On-site
$100 - $130/hr
Develop and apply simulation methods spanning molecular dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free‑energy calculations (FEP/TI) to support active drug ...
ML & Molecular Simulation Scientist
San Mateo, CA · On-site
$100 - $130/hr
Develop and apply simulation methods spanning molecular dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free‑energy calculations (FEP/TI) to support active drug ...
Develop and apply simulation methods spanning molecular dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free energy calculations (FEP/TI) to support active drug ...
Develop and apply simulation methods spanning molecular dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free energy calculations (FEP/TI) to support active drug ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$143K - $189K/yr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology - delivering high-performance math ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$143K - $189K/yr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology - delivering high-performance math ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$184 - $287.50/hr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology -- delivering high-performance math ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$184 - $287.50/hr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology -- delivering high-performance math ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$143K - $189K/yr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology - delivering high-performance math ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$143K - $189K/yr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology - delivering high-performance math ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$143K - $189K/yr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology - delivering high-performance math ...
Senior Software Engineer - MD Simulation Engineering
Santa Clara, CA · On-site
$143K - $189K/yr
This team builds the GPU-native simulation software that powers molecular dynamics at scale. We work at the intersection of GPU computing and computational biology - delivering high-performance math ...
ML & Molecular Simulation Scientist
San Mateo, CA · On-site
$110 - $150/hr
Develop and apply simulation methods spanning molecular dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free‑energy calculations (FEP/TI) to support active drug ...
ML & Molecular Simulation Scientist
San Mateo, CA · On-site
$110 - $150/hr
Develop and apply simulation methods spanning molecular dynamics, enhanced sampling (metadynamics, replica exchange, umbrella sampling), and free‑energy calculations (FEP/TI) to support active drug ...
Computational Chemistry - Theory Consultant
Emeryville, CA · On-site
$90 - $130/hr
Core Competencies Expertise in molecular simulation and interfacial electrostatics, with a strong ... Explicit-Ion Molecular Dynamics * Continuum Modeling * Electrostatic Prediction * Force ...
Computational Chemistry - Theory Consultant
Emeryville, CA · On-site
$90 - $130/hr
Core Competencies Expertise in molecular simulation and interfacial electrostatics, with a strong ... Explicit-Ion Molecular Dynamics * Continuum Modeling * Electrostatic Prediction * Force ...
Senior Staff Computational Materials Engineer - MLIPs
Fremont, CA · On-site
$166 - $350/hr
Design, train, validate and deploy MLIP architectures using DFT reference data to establish predictive molecular dynamics simulations for various semiconductor device materials and process chemistry ...
Senior Staff Computational Materials Engineer - MLIPs
Fremont, CA · On-site
$166 - $350/hr
Design, train, validate and deploy MLIP architectures using DFT reference data to establish predictive molecular dynamics simulations for various semiconductor device materials and process chemistry ...
... simulation, quantum chemistry, process design, and process-simulation workflows. You will play a ... molecular dynamics (MD), quantum chemistry, machine-learning interatomic potentials (MLIP), high ...
... simulation, quantum chemistry, process design, and process-simulation workflows. You will play a ... molecular dynamics (MD), quantum chemistry, machine-learning interatomic potentials (MLIP), high ...
... simulation, quantum chemistry, process design, and process-simulation workflows. You will play a ... molecular dynamics (MD), quantum chemistry, machine-learning interatomic potentials (MLIP), high ...
... simulation, quantum chemistry, process design, and process-simulation workflows. You will play a ... molecular dynamics (MD), quantum chemistry, machine-learning interatomic potentials (MLIP), high ...
Postdoctoral Appointee -- Atomistic and Molecular Scale Modeling of Materials, Onsite
Livermore, CA · On-site
Apply atomistic simulations (e.g., DFT, molecular dynamics, kinetic Monte Carlo) to study problems related to interstitial interactions with metals in extreme environments. * Interact with experts in ...
Postdoctoral Appointee -- Atomistic and Molecular Scale Modeling of Materials, Onsite
Livermore, CA · On-site
Apply atomistic simulations (e.g., DFT, molecular dynamics, kinetic Monte Carlo) to study problems related to interstitial interactions with metals in extreme environments. * Interact with experts in ...
Systems Engineer - Simulation Correctness
Palo Alto, CA · On-site
$190K - $250K/yr
Increase simulation throughput by two orders of magnitude * Expand simulation capabilities to ... FEM, FEA, Molecular Dynamics, FDTD * Experience as a systems engineer in a production environment ...
Systems Engineer - Simulation Correctness
Palo Alto, CA · On-site
$190K - $250K/yr
Increase simulation throughput by two orders of magnitude * Expand simulation capabilities to ... FEM, FEA, Molecular Dynamics, FDTD * Experience as a systems engineer in a production environment ...
Senior Staff Computational Materials Engineer - MLIPs
Fremont, CA · On-site
$166 - $350/hr
Design, train, validate and deploy MLIP architectures using DFT reference data to establish predictive molecular dynamics simulations for various semiconductor device materials and process chemistry ...
Senior Staff Computational Materials Engineer - MLIPs
Fremont, CA · On-site
$166 - $350/hr
Design, train, validate and deploy MLIP architectures using DFT reference data to establish predictive molecular dynamics simulations for various semiconductor device materials and process chemistry ...
Fullstack Software Engineer (Senior / Staff)
San Mateo, CA · On-site
$139K - $183K/yr
... simulation, and computational chemistry. We are looking for engineers excited to help develop new ... molecular dynamics jobs You are * A deep thinker who reasons from first principles, balances ...
Fullstack Software Engineer (Senior / Staff)
San Mateo, CA · On-site
$139K - $183K/yr
... simulation, and computational chemistry. We are looking for engineers excited to help develop new ... molecular dynamics jobs You are * A deep thinker who reasons from first principles, balances ...
Molecular Dynamics Simulation Intern information
What is a molecular dynamics simulation intern?
A Molecular Dynamics (MD) Simulation Intern assists in computational modeling of molecular systems to study their behavior over time. This typically involves using software like GROMACS, LAMMPS, or AMBER to run simulations, analyze results, and validate them against experimental data. Interns may work on optimizing simulation parameters, scripting automation workflows, or visualizing molecular interactions. The role is crucial in fields like drug discovery, material science, and biophysics, helping researchers understand molecular mechanisms at an atomic level.
What types of projects and responsibilities can I expect as a molecular dynamics simulation intern?
As a Molecular Dynamics Simulation Intern, you can expect to work on projects involving the setup, execution, and analysis of molecular simulations to study the behavior of biological or materials systems at the atomic level. Your daily tasks may include preparing input files, running simulation jobs, analyzing output data, and collaborating with researchers to refine computational models. You'll often work closely with experienced scientists and fellow interns, gaining hands-on experience with advanced simulation tools. This role offers valuable opportunities to develop technical expertise and contribute to ongoing research, which can open doors to future academic or industry positions in computational science.
What are the key skills and qualifications needed to thrive as a molecular dynamics simulation intern, and why are they important?
To thrive as a Molecular Dynamics Simulation Intern, you need a solid background in chemistry, physics, or related fields, along with knowledge of molecular modeling concepts. Familiarity with simulation software such as GROMACS, LAMMPS, or AMBER and basic programming skills in Python or C++ are often required. Strong analytical thinking, attention to detail, and effective communication are valuable soft skills for interpreting results and collaborating with research teams. These competencies are crucial for performing accurate simulations, troubleshooting computational issues, and contributing meaningfully to scientific projects.
What are the most commonly searched types of Molecular Dynamics Simulation jobs in California?
The most popular types of Molecular Dynamics Simulation jobs in California are:
What are popular job titles related to Molecular Dynamics Simulation Intern jobs in California?
For Molecular Dynamics Simulation Intern jobs in California, the most frequently searched job titles are:
What job categories do people searching Molecular Dynamics Simulation Intern jobs in California look for?
The top searched job categories for Molecular Dynamics Simulation Intern jobs in California are:
What cities in California are hiring for Molecular Dynamics Simulation Intern jobs?
Cities in California with the most Molecular Dynamics Simulation Intern job openings:

Manager, Molecular Simulation Engineering
Santa Clara, CA • On-site
9.6
Based on 18 frontline employees who took The Breakroom Quiz
7th of 246 rated software companies
Great coworkers
People enjoy working here
Good employer
Respectful managers
Learn new skills
Full-time
Re-posted 10 days ago
Job description
NVIDIA has been transforming computer graphics, PC gaming, and accelerated computing for more than 25 years. It's a unique legacy of innovation that's fueled by great technology-and amazing people. Today, we're tapping into the unlimited potential of AI to define the next era of computing. An era in which our GPU acts as the brains of computers, robots, and self-driving cars that can understand the world. Doing what's never been done before takes vision, innovation, and the world's best talent. As an NVIDIAN, you'll be immersed in a diverse, supportive environment where everyone is inspired to do their best work. Come join the team and see how you can make a lasting impact on the world.
NVIDIA BioNeMo is building the computational foundation for the next generation of biological discovery. We are looking for a hands-on technical manager to lead our MD Simulation Engineering team - a focused group whose mission is to enable biological simulation engines at scale.
You will lead a team of engineers building the GPU-native simulation software the scientific community depends on. This role combines player and mentor responsibilities. You will maintain technical credibility throughout the group's efforts and guide architectural decisions. You also be responsible for the roadmap, coordinate dependencies with NVIDIA and external partners, and support team growth.
What You'll Be Doing:
Lead, hire, and develop software engineers within a collaborative unit; build a culture of ownership, engineering excellence, and direct collaboration with researchers and authorities in the field.
Define vision, strategy, and roadmap for the division's GPU-accelerated simulation software.
Own end-to-end delivery across multiple workstreams; align partners, lead cross-team dependencies, and drive predictable execution.
Partner with Applied Science teams to translate research prototypes into production-quality, benchmarked software.
Build and maintain relationships with the community dedicated to molecular dynamics' modeling to ensure the team is delivering what the community needs.
Drive engineering completion: code quality, CI/CD, multi-SKU validation, and documentation standards.
Communicate progress, risks, and decisions clearly.
What We Need to See:
8+ overall years of software engineering experience, including 3+ years being responsible for an engineering team with direct reports.
Strong technical foundation in GPU computing and high-performance scientific software; ability to review builds, influence architectural directions, and maintain a high engineering standard across the team's work.
Experience shipping production GPU libraries, scientific computing software, or developer-facing APIs - you understand what it takes to go from prototype to a product that external developers depend on.
Familiarity with molecular dynamics simulation concepts (force fields, electrostatics, neighbor lists, periodic boundary conditions) sufficient to engage credibly with both colleagues and the MD simulator community.
Proven record to lead multi-functional dependencies, work across interpersonal boundaries without direct authority, and communicate technical progress clearly to senior leadership.
BS/MS in Computer Science, Computational Science, Physics, Chemistry, or a related field, or equivalent experience.
Ways to Stand Out from the Crowd:
You have shipped a GPU-accelerated scientific computing library or supplied to a major open-source MD simulation engine.
PhD-level education or comparable experience in computational chemistry, biophysics, applied mathematics, or computer science with a focus on HPC or scientific computing.
Experience with GPU compiler toolchains or kernel delivery mechanisms.
You have worked across the boundary between applied science and engineering - taking algorithmic research and turning it into a shipped, benchmarked product.
Active engagement in the MD simulation or computational chemistry community through publications, conference talks, or open-source contributions.
Widely considered to be one of the technology world's most desirable employers, NVIDIA offers highly competitive salaries and a comprehensive benefits package. As you plan your future, see what we can offer to you and your family www.nvidiabenefits.com/
Your base salary will be determined based on your location, experience, and the pay of employees in similar positions. The base salary range is 224,000 USD - 356,500 USD.You will also be eligible for equity and benefits.
This posting is for an existing vacancy.
NVIDIA uses AI tools in its recruiting processes.
NVIDIA is committed to fostering a diverse work environment and proud to be an equal opportunity employer. As we highly value diversity in our current and future employees, we do not discriminate (including in our hiring and promotion practices) on the basis of race, religion, color, national origin, gender, gender expression, sexual orientation, age, marital status, veteran status, disability status or any other characteristic protected by law.About Nvidia
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NVIDIA has been transforming computer graphics, PC gaming, and accelerated computing for more than 25 years. It's a unique legacy of innovation that's fueled by great technology--and amazing people. Today, we're tapping into the unlimited potential of AI to define the next era of computing. An era in which our GPU acts as the brains of computers, robots, and self-driving cars that can understand the world. Doing what's never been done before takes vision, innovation, and the world's best talent.
Industry
Computer and electronic product manufacturing
Company size
10,000+ Employees
Headquarters location
Santa Clara, CA, US