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Machine Learning Engineer Biotech information

What does a machine learning engineer do in biotech?

A Machine Learning Engineer in biotech applies advanced algorithms and data analysis techniques to solve biological and medical problems. They work with large datasets such as genomic sequences, medical images, or clinical records to develop predictive models, automate data analysis, and uncover insights that can accelerate drug discovery, diagnostics, and personalized medicine. Their work often involves close collaboration with biologists, data scientists, and software engineers to create tools and solutions that improve healthcare outcomes. Machine Learning Engineers in this field need a strong background in both computational methods and biological sciences.

How do machine learning engineers in biotech typically collaborate with research scientists and domain experts?

Machine Learning Engineers in biotech often work closely with research scientists and domain experts to translate complex biological problems into data-driven solutions. This collaboration involves regular meetings to understand experimental data, refine project goals, and iterate on model development based on domain feedback. Engineers are expected to communicate technical concepts clearly, adapt models to fit scientific needs, and help validate results alongside laboratory teams. This interdisciplinary environment fosters innovation but also requires flexibility and strong communication skills.

What are the key skills and qualifications needed to thrive as a machine learning engineer in biotech?

To thrive as a Machine Learning Engineer in Biotech, you need a solid background in computer science, statistics, and biology, often with an advanced degree in a related field. Experience with programming languages such as Python or R, machine learning frameworks like TensorFlow or PyTorch, and familiarity with bioinformatics tools are typically required. Strong problem-solving, communication, and interdisciplinary collaboration skills set standout candidates apart. These capabilities are crucial for developing effective models that drive scientific innovation and advance biotechnological research.

What is the difference between Machine Learning Engineer Biotech vs Data Scientist Biotech?

AspectMachine Learning Engineer BiotechData Scientist Biotech
Required CredentialsBachelor's or Master's in Computer Science, Data Science, or related; knowledge of ML frameworksBachelor's or Master's in Data Science, Statistics, or related; strong analytical skills
Work EnvironmentDevelops ML models, coding, deploying algorithms in biotech R&DAnalyzes biological data, interprets results, creates reports
Employer & Industry UsageBiotech firms, pharma companies, research labsBiotech companies, healthcare, research institutions

While both roles work with biological data, Machine Learning Engineers focus on developing and deploying ML algorithms, whereas Data Scientists analyze and interpret biological datasets to inform research and decision-making in biotech settings.

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Machine Learning Engineer Biotech jobs near you
Infographic showing various Machine Learning Engineer Biotech job openings in New Mexico as of August 2026, with employment types broken down into 9% Internship, and 91% Full Time. Highlights an 76% In-person, 16% Hybrid, and 8% Remote job distribution.

Senior AI Systems Engineer

Berriehill Research

Albuquerque, NM • On-site, Remote

$95K - $130K/yr

Full-time

Re-posted 10 days ago

Job description

Essential Functions:

  • Lead the deployment, integration, and operational support of AI platforms, tools, and services, ensuring compatibility with existing systems and enterprise processes.
  • Design, implement, monitor, and optimize AI infrastructure, working with server, cloud, and platform engineering teams.
  • Operationalize machine learning workflows and support AI-enabled applications from development through production deployment and sustainment.
  • Build and maintain CI/CD and MLOps pipelines for model packaging, testing, deployment, rollback, and lifecycle management.
  • Implement infrastructure automation using scripting, Infrastructure as Code, and configuration management practices.
  • Provide ongoing technical support, troubleshooting, root cause analysis, and documentation for AI platforms and user-facing AI services.
  • Maintain observability across AI systems through logging, metrics, performance monitoring, alerting, and incident response practices.
  • Ensure security, compliance, and governance requirements are met, including participation in audits, vulnerability management, and secure architecture reviews.
  • Assess and implement system enhancements to improve performance, scalability, reliability, and cost efficiency.
  • Collaborate across divisions to support diverse AI initiatives and align technical implementations with mission and business objectives.
  • Evaluate emerging AI tools, frameworks, and infrastructure approaches for operational fit, supportability, and long-term value.
  • Develop and maintain technical documentation, runbooks, architecture diagrams, and operational procedures.

Experience and Skills Required:

  • Bachelor’s degree in computer science, Engineering, Information Technology, or a related STEM field with 8-10 years of engineering experience. 
  • 2+ years of experience supporting AI/ML platforms, MLOps workflows, model deployment, or AI-enabled infrastructure.
  • Strong coding and automation skills in Python, Bash, or similar scripting languages.
  • Experience with AI/ML frameworks and tooling such as PyTorch, Hugging Face, or similar ecosystems.
  • Proficiency with DevOps and MLOps practices, including CI/CD pipelines, Git-based workflows, containerization, and Kubernetes.
  • Experience deploying AI/ML models or AI services into operational environments, including containerized, cloud, or high-performance computing environments.
  • Familiarity with security frameworks and compliance standards such as NIST and CMMC.
  • Familiarity with AI security functionality in enterprise environments including OAuth
  • Strong communication skills and the ability to collaborate effectively across technical and non-technical teams.

Preferred:

  • Advanced degree or certifications related to AI or machine learning.
  • Experience integrating AI models into scientific workflows.
  • Familiarity with large language model (LLM) APIs and orchestration frameworks such as OpenAI, Hugging Face, LangGraph, or LangChain.
  • Experience with model serving, inference optimization, or AI platform tools such as MLflow, Kubeflow, vLLM, or similar.
  • Experience with simulations for scientific or engineering projects, particularly physical systems simulations.
  • Experience with GPU-based systems or running AI models in HPC environments.
  • Experience writing and deploying MCP Servers on Kubernetes
  • DoD experience
  • Secret Security Clearance – Active or Inactive

Education:

  • Bachelor’s degree in CS, Software Engineering or other IT-related field or equivalent experience

REMOTE WORK NOTICE: This position may be performed fully remote, hybrid, or onsite at an ARA office. Preference will be given to candidates located onsite in the Albuquerque, NM and Raleigh, NC area.

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