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Flow Cytometry Manager Jobs in Boston, MA (NOW HIRING)

Sr. Scientist, Biomarkers

Boston, MA · On-site

$145K - $170K/yr

Manage external CROs and clinical partners. * Oversee development and implementation of PK, ADA, and biomarker assays. * Analyze complex immunology datasets (flow cytometry, CyTOF, scRNA-seq ...

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Flow Cytometry Manager information

See Boston, MA salary details

$25K

$66.6K

$111.4K

How much do flow cytometry manager jobs pay per year?

As of Sep 2, 2026, the average yearly pay for flow cytometry manager in Boston, MA is $66,648.00, according to ZipRecruiter salary data. Most workers in this role earn between $47,800.00 and $75,000.00 per year, depending on experience, location, and employer.

What is a flow cytometry manager?

A Flow Cytometry Manager oversees the daily operations of a flow cytometry laboratory, ensuring the proper use and maintenance of cytometry instruments. They manage staff, train researchers, and assist in data analysis for various experiments. The role involves troubleshooting technical issues, optimizing protocols, and ensuring compliance with safety and quality standards. Additionally, they may collaborate with scientists to develop and implement new flow cytometry techniques for research or clinical applications.

What are the key skills and qualifications needed to thrive as a flow cytometry manager?

To thrive as a Flow Cytometry Manager, you need advanced knowledge of flow cytometry techniques, cell sorting, laboratory management, and a background in life sciences, often supported by a relevant degree or higher. Proficiency with flow cytometry instruments (such as BD or Beckman Coulter systems), data analysis software, and possibly certifications like ASCP are typically required. Strong leadership, team management skills, and effective communication abilities make a candidate stand out in this position. These competencies ensure the laboratory runs smoothly, technical work meets quality standards, and the team is supported in achieving research and operational objectives.

What are some common challenges faced by a flow cytometry manager, and how can I prepare for them?

Flow Cytometry Managers often encounter challenges such as troubleshooting complex instrument issues, ensuring accurate data analysis, and maintaining high standards of quality control. You may also be responsible for managing a diverse team of technicians and scientists, scheduling instrument time efficiently, and keeping up with evolving regulatory or safety guidelines. To prepare for these challenges, strong problem-solving skills, ongoing professional development, and a proactive approach to team communication are essential. Gaining hands-on experience with different flow cytometry platforms and staying current with industry best practices can also help you excel in this role.

What are the most commonly searched types of Flow Cytometry jobs in Boston, MA?

The most popular types of Flow Cytometry jobs in Boston, MA are:

What job categories do people searching Flow Cytometry Manager jobs in Boston, MA look for?

The top searched job categories for Flow Cytometry Manager jobs in Boston, MA are:

What cities near Boston, MA are hiring for Flow Cytometry Manager jobs?

Cities near Boston, MA with the most Flow Cytometry Manager job openings:

Infographic showing various Flow Cytometry Manager job openings in Boston, MA as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $66,648 per year, or $32 per hour.

Sr. Scientist, Biomarkers

Scismic Inc

Boston, MA • On-site

$145K - $170K/yr

Full-time

Medical, Dental, Vision, Retirement, PTO

Posted 15 days ago


Job description

Apply here: https://scismic.com/jobs/senior-scientist-biomarker?source=ZipRecruiter


Scismic is supporting the growth of an exciting company in the Boston area! We're seeking a Senior Scientist to lead biomarker strategy and translational research for autoimmune disease programs. You'll collaborate across research and clinical teams to generate insights from patient samples, support clinical development, and advance innovative therapies.

Key Responsibilities

  •  Manage external CROs and clinical partners. 
  •  Oversee development and implementation of PK, ADA, and biomarker assays. 
  •  Analyze complex immunology datasets (flow cytometry, CyTOF, scRNA-seq, cytokine profiling, transcriptomics). 
  •  Support regulatory submissions, clinical reports, and scientific publications. 
  •  Evaluate emerging technologies to strengthen translational research. 

Qualifications

  •  Ph.D. in Immunology or related field. 
  •  3-7 years of industry experience in translational immunology, preferably in autoimmune diseases. 
  •  Experience with bioanalytical assay development and CRO management. 
  •  Hands-on expertise with immune profiling technologies.
  •  Strong understanding of human immunology and experience communicating scientific findings across cross-functional teams. 

Salary: $145,000–$170,000 depending on experience