ZipRecruiter

Log In

2

Entry Level Molecular Dynamics Simulation Jobs (NOW HIRING)

NorthEastern

Postdoctoral Research Associate

Boston, MA

$60K - $85K/yr

Experiences with catalysis (biological, homogeneous, or heterogeneous), excited-state simulation methods, multiscale simulations (broadly defined), molecular dynamics simulations, sampling techniques ...

next page

Showing results 1-20

All JobsEntry Level Molecular Dynamics Simulation Jobs

Entry Level Molecular Dynamics Simulation information

See salary details

$39K

$123.4K

$190.5K

How much do entry level molecular dynamics simulation jobs pay per year?

As of Jun 9, 2026, the average yearly pay for entry level molecular dynamics simulation in the United States is $123,399.00, according to ZipRecruiter salary data. Most workers in this role earn between $92,000.00 and $146,500.00 per year, depending on experience, location, and employer.

What is the difference between Entry Level Molecular Dynamics Simulation vs Entry Level Computational Chemist?

AspectEntry Level Molecular Dynamics SimulationEntry Level Computational Chemist
Required CredentialsBachelor's in Chemistry, Physics, or related field; basic knowledge of simulation softwareBachelor's in Chemistry, Chemical Engineering, or related; familiarity with computational tools
Work EnvironmentResearch labs, academic institutions, industry R&DResearch labs, pharmaceutical companies, academic settings
Industry UsageMaterial science, biochemistry, pharmaceuticalsDrug discovery, materials research, chemical analysis

Both roles involve computational work in chemistry-related fields, but Molecular Dynamics Simulation focuses specifically on simulating molecular interactions over time, while Computational Chemists may perform a broader range of modeling and analysis tasks. The choice depends on your interest in dynamic simulations versus general computational chemistry applications.

What are the typical day-to-day tasks for someone in an entry-level molecular dynamics simulation role?

In an entry-level molecular dynamics simulation position, you can expect to spend much of your day setting up and running computational experiments, analyzing simulation data, and troubleshooting issues with simulation software. You'll likely collaborate closely with more senior researchers, computational scientists, and sometimes experimentalists to ensure your simulations align with project goals. Documentation and reporting of your findings are also important, as is staying updated on new methodologies and tools in the field. Over time, you'll gain opportunities to contribute to research publications and take on more complex simulation projects.

What are entry level molecular dynamics simulation jobs?

Entry level molecular dynamics simulation jobs involve using computational methods to model the physical movements of atoms and molecules. These positions are typically suitable for recent graduates or those new to the field, and may include tasks such as setting up simulations, analyzing data, and assisting with research projects in fields like chemistry, biology, or materials science. Entry level roles often require a background in a relevant scientific discipline, familiarity with simulation software, and basic programming skills. These jobs provide a foundation for gaining expertise in computational research and can lead to more advanced positions in academia or industry.

What are the key skills and qualifications needed to thrive as an Entry Level Molecular Dynamics Simulation professional, and why are they important?

To thrive as an Entry Level Molecular Dynamics Simulation professional, you need a solid background in physics, chemistry, or materials science, often supported by a relevant bachelor's or master's degree. Familiarity with simulation software such as GROMACS, LAMMPS, or AMBER, as well as proficiency in programming languages like Python or C++, is typically required. Analytical thinking, attention to detail, and strong problem-solving abilities are crucial soft skills that set candidates apart. These combined skills ensure accurate simulation results, effective troubleshooting, and meaningful scientific insights in research or industrial applications.
More about Entry Level Molecular Dynamics Simulation jobs
What are the most commonly searched types of Molecular Dynamics Simulation jobs? The most popular types of Molecular Dynamics Simulation jobs are:
What job categories do people searching Entry Level Molecular Dynamics Simulation jobs look for? The top searched job categories for Entry Level Molecular Dynamics Simulation jobs are:
Entry Level Molecular Dynamics Simulation jobs near you
Radial Postdoctoral Fellow - Dynamic Structural Biology (diffUSE Project)

Radial Postdoctoral Fellow - Dynamic Structural Biology (diffUSE Project)

Astera Institute

Ithaca, NY • On-site

$70K/yr

Contractor

Posted 2 days ago

Job description

Position Summary

The diffUSE Project is seeking a highly motivated structural biologist to push the boundaries of X-ray crystallography for studying protein dynamics. Work will be done within the Ando lab. The Ando lab is known for developing and integrating advanced structural techniques (crystallography, SAXS, and cryo-EM) and bioinformatics to visualize protein motions underlying enzyme catalysis and allostery. The postdoctoral fellow would contribute to the Diffuse Project, a multi-institution initiative around mainstreaming diffuse scattering techniques, which use the hidden data from X-ray crystallography experiments to extract information on protein motion. The project is an open-science collaboration that brings together expertise across disciplines in
a goal-driven, team-oriented environment. The successful candidate will drive the application of diffuse scattering to biological questions by growing protein crystals, collecting synchrotron data, and applying computational tools developed within the collaboration.


Applicants should hold a PhD in structural biology or a related field and have experience with X-ray crystallography. Strong experimental skills, quantitative thinking, and a rigorous approach to problem-solving are essential. The successful candidate will be embedded within one or more diffUSE Project teams, depending on their interests and expertise. Current areas of opportunity include protein expression and purification, software development for data processing and analysis, molecular dynamics simulations, and theoretical approaches such as model refinement and phase retrieval. In addition to contributing to the broader collaboration, the candidate will participate fully in Ando Lab activities and demonstrate leadership through mentoring and fostering a positive, collaborative, and productive research environment. Strong written and oral communication skills are required, as the position involves contributing to ongoing dissemination of results through publications as well as open-science formats such as
online notebooks and blog posts.


Responsibilities

  • Design and execute experiments to probe protein dynamics using X-ray crystallography, including crystal growth, optimization, and data collection

  • Collect and analyze diffraction data (including diffuse scattering) at synchrotron facilities

  • Apply and/or develop computational tools for modeling conformational ensembles from experimental data

  • Collaborate with interdisciplinary teams across the diffUSE Project (experimental, computational, and theoretical groups)

  • Contribute to method development and benchmarking for dynamic structural biology

  • Mentor graduate and undergraduate students in the team

  • Communicate results through open-science platforms


Required Qualifications

  • PhD in Structural Biology, Biophysics, Biochemistry, Chemistry, or a related field

  • Demonstrated experience with X-ray crystallography (data collection, processing, refinement)

  • Strong experimental skills in protein expression, purification, and/or crystallization

  • Ability to think rigorously about physical models and experimental data

  • Strong written and verbal communication skills

  • Ability to work effectively in a collaborative, interdisciplinary environment


Preferred Qualifications

  • Experience with advanced X-ray instrumentation

  • Experience developing experimental or theoretical approaches for dynamic structural biology (such as time-resolved X-FEL, energy landscapes by cryo-EM)

  • Experience with scientific programming (Python, MATLAB, etc.)

  • Engagement in open-science practices

Application Instructions

Please submit:

  • CV

  • Cover letter

  • Contact information for 3 references


Applications will be reviewed on a rolling basis until the position is filled.

Compensation Range: $70K