1

Computational Spatial Transcriptomics Jobs in Boston, MA

Bachelor's degree in Computer Science, Machine Learning, Computational Biology, Bioinformatics ... Familiarity with single-cell RNA-seq, spatial transcriptomics, CRISPR assay data, or other high ...

Showing results 41-44

Computational Spatial Transcriptomics information

See Boston, MA salary details

$44

$59

$80

How much do computational spatial transcriptomics jobs pay per hour?

As of Sep 7, 2026, the average hourly pay for computational spatial transcriptomics in Boston, MA is $59.67, according to ZipRecruiter salary data. Most workers in this role earn between $50.91 and $79.90 per hour, depending on experience, location, and employer.

What is computational spatial transcriptomics?

Computational spatial transcriptomics is a field that combines advanced computational methods with spatial transcriptomics, a technique that measures gene expression within the physical context of tissue samples. It involves processing and analyzing large datasets to map where specific genes are active within tissues, helping researchers understand how cells interact and function in their native environments. This approach is crucial for studies in developmental biology, cancer research, and neuroscience, as it provides insights into cellular organization and tissue architecture. Computational tools help extract meaningful patterns from complex data, enabling discoveries that were previously impossible with traditional methods.

What are some typical challenges faced when working in computational spatial transcriptomics, and how can new team members prepare for them?

Professionals in computational spatial transcriptomics often encounter challenges related to handling and analyzing large, complex datasets that combine spatial and gene expression information. Integrating data from different technologies and ensuring data quality can be demanding, requiring strong programming skills and familiarity with bioinformatics pipelines. New team members can prepare by strengthening their skills in statistical analysis, programming languages like Python or R, and staying updated on the latest spatial transcriptomics techniques. Collaborating closely with experimental biologists and data scientists is also key to overcoming these challenges and driving successful research outcomes.

What are the key skills and qualifications needed to thrive as a computational spatial transcriptomics scientist, and why are they important?

To excel in Computational Spatial Transcriptomics, you need a strong background in bioinformatics, genomics, and statistical data analysis, typically supported by advanced degrees in computational biology or related fields. Familiarity with programming languages (such as R and Python), spatial transcriptomics platforms (like 10x Genomics Visium), and high-throughput sequencing data analysis tools is essential. Strong problem-solving skills, attention to detail, and effective communication are crucial soft skills for interpreting complex datasets and collaborating with multidisciplinary teams. These competencies ensure accurate data interpretation, innovative research, and successful integration of spatial transcriptomics insights into biological and clinical applications.

What is the difference between Computational Spatial Transcriptomics vs Computational Biologist?

AspectComputational Spatial TranscriptomicsComputational Biologist
Required CredentialsAdvanced degrees in bioinformatics, computational biology, or related fields; experience with spatial data analysisTypically a PhD or Master's in biology, bioinformatics, or related disciplines; strong programming skills
Work EnvironmentResearch labs, biotech companies, academic institutions focusing on spatial genomicsResearch institutions, biotech firms, academia working on biological data analysis
Industry UsageSpecialized in spatial transcriptomics techniques and data interpretationBroad biological data analysis across various fields

Computational Spatial Transcriptomics focuses on analyzing spatial gene expression data within tissues, requiring specialized skills in spatial data processing. In contrast, Computational Biologists work on a wider range of biological data types. While both roles involve bioinformatics expertise, the former emphasizes spatial data analysis techniques specific to transcriptomics.

What are popular job titles related to Computational Spatial Transcriptomics jobs in Boston, MA?

For Computational Spatial Transcriptomics jobs in Boston, MA, the most frequently searched job titles are:

What job categories do people searching Computational Spatial Transcriptomics jobs in Boston, MA look for?

The top searched job categories for Computational Spatial Transcriptomics jobs in Boston, MA are:

What cities near Boston, MA are hiring for Computational Spatial Transcriptomics jobs?

Cities near Boston, MA with the most Computational Spatial Transcriptomics job openings:

Infographic showing various Computational Spatial Transcriptomics job openings in Boston, MA as of August 2026, with employment types broken down into 72% Full Time, 24% Part Time, 1% Temporary, and 3% Contract. Highlights an 74% Physical, 2% Hybrid, and 24% Remote job distribution, with an average salary of $124,121 per year, or $59.7 per hour.

Applied AI Engineer

GlaxoSmithKline

Cambridge, MA • On-site

Full-time

Medical, Retirement, PTO

Re-posted 16 days ago


GlaxoSmithKline rating

8.9

Company rating: 8.9 out of 10

Based on 19 frontline employees who took The Breakroom Quiz

9th of 86 rated pharmaceutical


Job description

At GSK, we unite science, technology and talent to get ahead of disease together. Our ambition is to positively impact the health of 2.5 billion people over the next decade. We are building a future where state-of-the-art software, AI, and machine learning enable us to discover new therapies and personalized medicines that drive better outcomes for patients-at reduced cost and with fewer side effects.
The Applied AI team sits at the intersection of business need and technical capability within the AI/ML department. We directly support business units with AI/ML-related challenges, acting as ambassadors for responsible AI across the organization. This role is your opportunity to work at the frontier of applied machine learning in one of the world's leading biopharma companies, translating cutting-edge AI research into real scientific and business impact

About the Role:
As an Applied AI Engineer, you will be embedded within cross-functional teams to deliver practical, high-impact AI/ML solutions aligned with GSK's R&D and business priorities. You will partner closely with scientists, product teams, and domain experts to design, build, and deploy machine learning models and AI-powered tools that accelerate drug discovery, improve decision-making, and enable responsible use of AI across the enterprise.
This role is hands-on and consultative in equal measure. You will evaluate use-case feasibility, prototype solutions rapidly, architect model integrations, and transfer knowledge so that partner teams can operate independently. You will also contribute to the development of reusable patterns, baseline models, and tested pipelines for common AI/ML tasks within GSK's approved.

Key Responsibilities:

Advisory & Solution Design

  • Provide tailored guidance to business units on AI/ML use cases, feasibility, model selection, and deployment options, particularly in scientific domains without active AI/ML engineering efforts.
  • Co-design prototypes and proof-of-concepts (PoCs) with product and domain teams to validate ideas quickly and de-risk larger investments.
  • Translate complex stakeholder requirements into well-scoped technical solutions with clear success criteria and handover plans.

Model Development & Deployment

  • Build, train, evaluate, and iterate on ML models for real-world scientific and business problems-including but not limited to NLP/LLM applications, knowledge graphs, causal inference, computer vision, and predictive modeling.
  • Package trained models into production-ready services (APIs, containerized deployments) using GSK's cloud infrastructure (GCP/AWS/Azure).
  • Develop and maintain agentic AI systems, multi-agent architectures, and LLM-based tools where appropriate.
  • Share reusable patterns, baseline models, and tested pipelines for common AI/ML tasks.
  • Embed privacy, ethics, and regulatory considerations into every engagement from the outset.

Knowledge Transfer & Enablement

  • Run workshops, seminars, and hands-on training sessions to increase AI literacy across the organization.
  • Embed within business/research units for time-limited engagements (typically 6-8 weeks) to accelerate delivery and transfer skills.
  • Communicate relevant issues, requests, and opportunities from business units back to AI/ML product leads.
Why you?

Basic Qualifications:

  • Bachelor's degree in Computer Science, Machine Learning, Computational Biology, Bioinformatics, Statistics, Engineering, or a related quantitative discipline; OR equivalent professional experience as a software/ML engineer.
  • 2+ years of professional experience developing and deploying machine learning models (with a Bachelor's); 2+ years with a Master's or PhD.
  • Expertise in Python, including ML/data science libraries (PyTorch, TensorFlow, JAX, scikit-learn, pandas, numpy).
  • Experience with cloud platforms (GCP, AWS, or Azure) and containerization (Docker, Kubernetes).
  • Strong understanding of ML fundamentals: supervised/unsupervised learning, deep learning, model evaluation, feature engineering, and experiment tracking.
  • Experience working in cross-functional teams and communicating technical concepts to non-technical stakeholders.
  • Experience working in healthcare, pharma, or biological domains.

Preferred Qualifications:

  • Experience in pharma, biotech, or life sciences-particularly in drug discovery, genomics, clinical data, or biological data analysis.
  • Hands-on experience building LLM-based applications, agentic AI systems, RAG pipelines, or multi-agent architectures (e.g., LangChain, LangGraph, AutoGen).
  • Experience with knowledge graph construction, causal inference, or large perturbation models.
  • Familiarity with single-cell RNA-seq, spatial transcriptomics, CRISPR assay data, or other high-dimensional biological datasets.
  • Experience with MLOps practices: CI/CD for ML, model monitoring, experiment tracking (MLflow, Weights & Biases), and reproducible research workflows.
  • Contributions to open-source ML/AI projects or peer-reviewed publications in applied ML.
  • Background or demonstrated interest in responsible AI, AI ethics, or model governance.
  • Strong software engineering practices: version control (Git/GitHub), code review, testing, and documentation.
  • Experience evaluating and integrating third-party AI/ML vendor tools and platforms.

#LI-GSK

#GSKAIML


Skills

Artificial Intelligence (AI), Artificial Intelligence Ethics, Artificial Neural Networks (ANNS), Classification Models, Deep Learning, Intelligent Automation (IA), Machine Learning (ML), Model Evaluation, Model Validation, Predictive Modeling, Probabilistic Modeling, Python (Programming Language), Test Documentation If you are based in Cambridge, MA; Waltham, MA; Rockville, MD; or San Francisco, CA, the annual base salary for new hires in this position ranges $136,125 to $226,875. The US salary ranges take into account a number of factors including work location within the US market, the candidate's skills, experience, education level and the market rate for the role. In addition, this position offers an annual bonus and eligibility to participate in our share based long term incentive program which is dependent on the level of the role. Available benefits include health care and other insurance benefits (for employee and family), retirement benefits, paid holidays, vacation, and paid caregiver/parental and medical leave. If salary ranges are not displayed in the job posting for a specific country, the relevant compensation will be discussed during the recruitment process.

Please visit GSK US Benefits Summary to learn more about the comprehensive benefits program GSK offers US employees.

Why GSK?

Uniting science, technology and talent to get ahead of disease together.

GSK is a global biopharma company with a purpose to unite science, technology and talent to get ahead of disease together. We aim to positively impact the health of 2.5 billion people by the end of the decade, as a successful, growing company where people can thrive. We get ahead of disease by preventing and treating it with innovation in specialty medicines and vaccines. We focus on four therapeutic areas: respiratory, immunology and inflammation; oncology; HIV; and infectious diseases - to impact health at scale.

People and patients around the world count on the medicines and vaccines we make, so we're committed to creating an environment where our people can thrive and focus on what matters most. Our culture of being ambitious for patients, accountable for impact and doing the right thing is the foundation for how, together, we deliver for patients, shareholders and our people.

If you require an accommodation or other assistance to apply for a job at GSK, please contact the appropriate Recruitment Staff by emailing us at -usrecruitment.adjustments@gsk.com

GSK is an Equal Opportunity Employer. This ensures that all qualified applicants will receive equal consideration for employment without regard to race, color, religion, sex (including pregnancy, gender identity, and sexual orientation), parental status, national origin, age, disability, genetic information (including family medical history), military service or any basis prohibited under federal, state or local law.

Important notice to Employment businesses/ Agencies

GSK does not accept referrals from employment businesses and/or employment agencies in respect of the vacancies posted on this site. All employment businesses/agencies are required to contact GSK's commercial and general procurement/human resources department to obtain prior written authorization before referring any candidates to GSK. The obtaining of prior written authorization is a condition precedent to any agreement (verbal or written) between the employment business/ agency and GSK. In the absence of such written authorization being obtained any actions undertaken by the employment business/agency shall be deemed to have been performed without the consent or contractual agreement of GSK. GSK shall therefore not be liable for any fees arising from such actions or any fees arising from any referrals by employment businesses/agencies in respect of the vacancies posted on this site.

Please note that if you are a US Licensed Healthcare Professional or Healthcare Professional as defined by the laws of the state issuing your license, GSK may be required to capture and report expenses GSK incurs, on your behalf, in the event you are afforded an interview for employment. This capture of applicable transfers of value is necessary to ensure GSK's compliance to all federal and state US Transparency requirements. For more information, please visit the Centers for Medicare and Medicaid Services (CMS) website at https://openpaymentsdata.cms.gov/


What GlaxoSmithKline employees say

Pay

Benefits

Hours and flexibility

Workplace

Get the full story on Breakroom


GlaxoSmithKline logo

About GlaxoSmithKline

Sourced by ZipRecruiter

GlaxoSmithKline is a globally recognized pharmaceutical and healthcare company based in Philadelphia, PA, USA. Originated from a merger between Glaxo Wellcome and SmithKline Beecham in 2000, the company excels in the pharmaceutical industry and holds a leading position in making medicines, vaccines, and consumer healthcare products. GSK's mission is to improve the quality of human life by enabling people to do more, feel better, and live longer. They adhere to core values of transparency, integrity, respect for people, and patient-focus, reflecting in their endeavors to conduct research and deliver innovative healthcare solutions to patients and consumers worldwide.

Industry

Scientific research and development services

Company size

10,000+ Employees

Headquarters location

Philadelphia, PA, US