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Bioinformatics Test Engineer Jobs (NOW HIRING)

Vytwo

Bioinformatics Pipeline Test Engineer

Prosper, TX · On-site

Bioinformatics Pipeline Test Engineer Domain EXP : (Healthcare Domain) Experience: 2+ Years of exp Location: San Diego CA "Onsite client office" Duration: 6 Months JD in brief: For these candidates ...

Natera

Software Test Engineer

Boulder, CO · On-site

We sit at the intersection of molecular biology, bioinformatics, and next-generation sequencing ... test scenarios * Identify, document, and track software defects; collaborate with engineering teams ...

Saviance

Senior Bioinformatics QA Engineer

... test plans and test cases for bioinformatics pipelines, including unit, integration, and system ... developers to understand pipeline requirements and ensure appropriate testing strategies. • ...

QIAGEN

Bioinformatics Engineer, QDI

Redwood City, CA · On-site

$130K - $150K/yr

As a Bioinformatics Engineer in the Content Development team, you will play a critical role in ... You will also contribute to data quality efforts by defining and implementing test plans, helping ...

Qiagen

Bioinformatics Engineer, QDI

Redwood City, CA · On-site

$130K - $150K/yr

As a Bioinformatics Engineer in the Content Development team, you will play a critical role in ... You will also contribute to data quality efforts by defining and implementing test plans, helping ...

Windber, PA

Bioinformatics Engineer

Windber, PA · On-site

Evaluate and test both internal and external systems, with emphasis for data visualization and ... Keep up to date with advancements in bioinformatics and software engineering for the continuous ...

Eliassen Group

Software Test Engineer

San Diego, CA · On-site

$55 - $64.75/hr

Hybrid in San Diego, CA Our client seeks a Software Test Engineer to lead and execute advanced ... Bachelor's or Master's degree in Computer Science, Bioinformatics, Engineering, or related field.

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How much do bioinformatics test engineer jobs pay per year?

As of Sep 13, 2026, the average yearly pay for bioinformatics test engineer in the United States is $131,053.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,000.00 and $157,000.00 per year, depending on experience, location, and employer.

What is a bioinformatics test engineer?

A Bioinformatics Test Engineer is a professional who designs, develops, and executes testing procedures to ensure the quality, accuracy, and reliability of bioinformatics software and tools. They work closely with software developers and scientists to validate algorithms, data processing pipelines, and user interfaces used in analyzing biological data. Their role is crucial in ensuring that bioinformatics applications produce correct and reproducible results, which is essential for scientific research and clinical applications.

What are the key skills and qualifications needed to thrive as a bioinformatics test engineer?

To thrive as a Bioinformatics Test Engineer, you need a strong background in biology, computer science, and software testing, often supported by a degree in bioinformatics, computer science, or a related field. Familiarity with programming languages like Python or R, experience using bioinformatics tools (such as BLAST or GATK), and knowledge of testing frameworks and automation tools are typically required. Attention to detail, problem-solving skills, and effective communication are crucial soft skills for this role. These skills ensure the accuracy, reliability, and usability of bioinformatics software, which is essential for advancing research and clinical applications.

What are some common challenges faced by bioinformatics test engineers when validating complex bioinformatics software?

Bioinformatics Test Engineers often encounter challenges related to the complexity and variability of biological data, which can make it difficult to create comprehensive test cases. Ensuring accuracy and reproducibility across various datasets, platforms, and algorithms is crucial but can be time-consuming. Additionally, collaborating with both software developers and domain scientists requires strong communication skills to bridge the gap between technical and biological perspectives. Staying updated on emerging tools and standards in both bioinformatics and software testing is also essential for success in this role.

What are popular job titles related to Bioinformatics Test Engineer jobs?

For Bioinformatics Test Engineer jobs, the most frequently searched job titles are:

Infographic showing various Bioinformatics Test Engineer job openings in the United States as of September 2026, with employment types broken down into 1% As Needed, 84% Full Time, 12% Part Time, 2% Contract, and 1% Nights. Highlights an 90% Physical, 1% Hybrid, and 9% Remote job distribution, with an average salary of $131,053 per year, or $63 per hour.

Bioinformatics Pipeline Test Engineer - Healthcare - San Diego CA - Local to CA or who can relocate

Prosper, TX • On-site

Vytwo
See more jobs at Vytwoexternal

Full-time

Posted 18 days ago

Job description

Title: Bioinformatics Pipeline Test Engineer
Domain: Healthcare
Location: San Diego, CA - Local to CA or who can relocate
Duration: 6 Months
Experience: 2+ years
Must have:          
  • Bioinformatics OR Genomics
  • NGS OR "Next Generation Sequencing"
  • VCF OR BAM OR FASTQ
  • Python
  • Testing OR QA OR "Quality Engineer" OR Validation
  • Git

Job Description:
Role Overview
We are seeking a Bioinformatics Test Engineer to validate and ensure the quality of NGS data pipelines and bioinformatics workflows. The role requires a strong blend of bioinformatics knowledge, QA expertise, and automation skills.
Key Responsibilities
• Design and execute testing strategies for NGS pipelines (alignment, variant calling, annotation)
• Perform data validation, regression testing, and discrepancy analysis
• Develop automated test scripts (Python)
• Translate requirements into test cases and validation criteria
• Work with CI/CD pipelines and cloud-based workflows
• Collaborate with cross-functional teams to ensure data accuracy and reliability
Required Skills
• Strong understanding of NGS workflows (FASTQ, BAM, VCF)
• Experience in bioinformatics pipeline testing or QA
• Proficiency in Python scripting
• Hands-on with Git and CI/CD tools
• Experience with cloud platforms (AWS/GCP/Azure) and data pipelines
• Strong problem-solving and communication skills
Preferred
• Experience in the biotech/life sciences domain
• Familiarity with Nextflow, Snakemake, or similar workflows
• Exposure to regulated environments (CLIA/FDA)
What We’re Looking For
• Strong testing mindset + hands-on engineering skills
• Ability to debug pipelines and explain thought process clearly
• Experience with real-world data workflows (not just academic projects)
• Mentions NGS pipelines + testing together
• Has Python + Git + CI/CD
• Mentions variant calling / VCF validation
• Worked on cloud or production pipelines
Reject or deprioritize if:
• Only academic bioinformatics (no testing/QA)
• Only statistics validation (no system testing)
• No Python or automation
• No infra experience (cloud / CI/CD / DB)
• Only local scripts, no real pipelines
 
Other High Priority Keywords
  • Variant Calling
  • Pipeline Testing
  • Regression Testing
  • Test Strategy OR Test Case Design
  • Data Validation
  • Golden Dataset OR Reference Dataset
  • CI/CD OR "GitHub Actions" OR GitLab OR "Azure DevOps"
  • AWS OR S3 OR Cloud
  • Nextflow OR Snakemake OR WDL OR Cromwell
  • Automation Testing