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Bioinformatics Programmer Analyst Jobs in Connecticut

micro1 AI

Bioinformatics Software Engineer

Hartford, CT · Remote

$80 - $110/hr

Analyze and interpret small-molecule and drug discovery datasets using advanced computational biology, bioinformatics, and cheminformatics methods. * Curate, annotate, and validate chemical and ...

micro1 AI

Bioinformatics Software Engineer

Waterbury, CT · Remote

$80 - $110/hr

Analyze and interpret small-molecule and drug discovery datasets using advanced computational biology, bioinformatics, and cheminformatics methods. * Curate, annotate, and validate chemical and ...

micro1 AI

Bioinformatics Software Engineer

Bridgeport, CT · Remote

$80 - $110/hr

Analyze and interpret small-molecule and drug discovery datasets using advanced computational biology, bioinformatics, and cheminformatics methods. * Curate, annotate, and validate chemical and ...

micro1 AI

Bioinformatics Software Engineer

Stamford, CT · Remote

$80 - $110/hr

Analyze and interpret small-molecule and drug discovery datasets using advanced computational biology, bioinformatics, and cheminformatics methods. * Curate, annotate, and validate chemical and ...

micro1 AI

Bioinformatics Software Engineer

New Haven, CT · Remote

$80 - $110/hr

Analyze and interpret small-molecule and drug discovery datasets using advanced computational biology, bioinformatics, and cheminformatics methods. * Curate, annotate, and validate chemical and ...

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All JobsBioinformatics Programmer Analyst JobsBioinformatics Programmer Analyst Jobs in Connecticut

Bioinformatics Programmer Analyst information

What is a bioinformatics programmer analyst?

A Bioinformatics Programmer Analyst is a professional who combines knowledge of biology, computer science, and statistics to manage, analyze, and interpret complex biological data, often using programming and software development skills. They typically work with large datasets such as genomic sequences, gene expression profiles, or proteomics data to derive meaningful insights for research or clinical applications. Their role often involves developing software tools, writing scripts for data analysis, and collaborating with biologists and other scientists to solve research problems. Bioinformatics Programmer Analysts are essential in fields like genomics, pharmaceutical research, and personalized medicine.

What are some common challenges faced by bioinformatics programmer analysts when integrating new data types into existing pipelines?

Bioinformatics Programmer Analysts often encounter challenges such as data heterogeneity, inconsistent formats, and varying quality when integrating new data types into established analysis pipelines. Addressing these issues requires careful data preprocessing, validation, and sometimes developing custom scripts or modules to ensure compatibility. Collaboration with biologists and data scientists is essential to understand the context of the new data and to tailor solutions that maintain the reliability and reproducibility of results. Staying adaptable and up-to-date with evolving bioinformatics tools and standards also helps in overcoming these integration challenges.

What are the key skills and qualifications needed to thrive as a bioinformatics programmer analyst?

To thrive as a Bioinformatics Programmer Analyst, you need strong programming skills (such as Python, R, or Perl), a background in biology or bioinformatics, and typically a bachelor's or master's degree in a relevant field. Familiarity with bioinformatics tools, databases (like NCBI, Ensembl), and experience using Linux environments and version control systems (like Git) are essential. Analytical thinking, problem-solving abilities, and effective communication are crucial soft skills for interpreting data and collaborating with research teams. These competencies are vital for accurately analyzing biological data and delivering actionable insights in research or clinical settings.

What is the difference between Bioinformatics Programmer Analyst vs Bioinformatics Data Scientist?

AspectBioinformatics Programmer AnalystBioinformatics Data Scientist
Required CredentialsBachelor's in Bioinformatics, Computer Science, or related field; programming skillsBachelor's or Master's in Bioinformatics, Data Science, or related; strong statistical and programming skills
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, biotech firms, healthcare analytics
Employer & Industry UsageUsed in biotech, pharma, healthcare for data analysis and software development

The Bioinformatics Programmer Analyst primarily focuses on developing software tools and analyzing biological data using programming skills. In contrast, the Bioinformatics Data Scientist emphasizes statistical analysis and data modeling to interpret complex biological datasets. Both roles require strong programming knowledge and are common in biotech and healthcare industries, but their core responsibilities differ in software development versus data analysis.

What are popular job titles related to Bioinformatics Programmer Analyst jobs in Connecticut? For Bioinformatics Programmer Analyst jobs in Connecticut, the most frequently searched job titles are:
What job categories do people searching Bioinformatics Programmer Analyst jobs in Connecticut look for? The top searched job categories for Bioinformatics Programmer Analyst jobs in Connecticut are:
What cities in Connecticut are hiring for Bioinformatics Programmer Analyst jobs? Cities in Connecticut with the most Bioinformatics Programmer Analyst job openings:
Bioinformatics Programmer Analyst jobs near you
Infographic showing various Bioinformatics Programmer Analyst job openings in Connecticut as of August 2026, with employment types broken down into 1% Internship, 85% Full Time, 8% Part Time, and 6% Contract. Highlights an 79% Physical, 8% Hybrid, and 13% Remote job distribution.

Software Engineer II - Bioinformatics R&D - Remote

SEMA4

Stamford, CT • On-site, Remote

Full-time

Re-posted 5 days ago

Job description

Sema4 is a patient-centered health intelligence company dedicated to advancing healthcare through data-driven insights. Sema4 is transforming healthcare by applying AI and machine learning to multidimensional, longitudinal clinical and genomic data to build dynamic models of human health and defining optimal, individualized health trajectories. Centrellis®, our innovative health intelligence platform, is enabling us to generate a more complete understanding of disease and wellness and to provide science-driven solutions to the most pressing medical needs. Sema4 believes that patients should be treated as partners, and that data should be shared for the benefit of all.
Sema4 is seeking a talented, self-motivated Software Engineer II - Bioinformatics R&D to contribute to cutting-edge translational bioinformatics and clinical product development. As a member of the R&D Bioinformatics department, you will act as a critical member of the Sema4 clinical and research ecosystem focused on innovation, reliability, and quality analysis of high-throughput data at an unprecedented scale. You will use advanced cloud computing technologies to do big data analytics. You will be part of an interdisciplinary team that develops computational methods and pipelines to interpret large-scale human genome and transcriptome sequencing data to understand mutations and mutation processes in cancer and reproductive health and to translate that understanding to clinical utility. You will develop systems for integrating novel informatics and genomics tools and methodologies into clinical products and practices.
RESPONSIBILITIES
  • Carry out software design, coding, testing, debugging, and documentation
  • Automate existing analysis workflows, migrate existing workflows to cloud platforms, and develop new workflows and pipelines for clinical and research projects
  • Develop, implement, and follow best practices in software development, code versioning, software testing, and deployment
  • Collaborate closely with scientists, clinicians, and product managers to design, engineer, and implement analytics pipeline solutions in the Amazon AWS cloud environment
  • Deliver high-quality, well-tested software to the production bioinformatics team for use in clinical products
  • Contribute to bioinformatics research analysis
  • Communicate effectively with collaborators (computational and bioinformatics scientists on R&D and production teams, IT/HPC, clinical lab directors, knowledgebase and curation teams, wet lab staff) to understand and satisfy product and research analysis needs
  • Train and provide support for bioinformatics scientists and other team members in internally developed best practices for software development, testing, and software development lifecycle (SDLC) policies

QUALIFICATIONS
  • M.S. in Computer Science, Computer Engineering, Bioinformatics, Computational Biology, or related fields. B.S. plus equivalent experience will be considered
  • 2+ years of post-graduate software development experience
  • Working in a team, self-motivation, ability to manage multiple tasks simultaneously, ability to solve problems independently
  • Possess strong understanding of computer science fundamentals, algorithms, and software engineering best practices
  • Strong coding proficiency in Python and R programming languages or similar. Experience with multiple coding languages such as Java/Scala is preferred.
  • Programming experience in Unix/Linux environment
  • Experience with Docker or similar software container platform
  • Hands-on experience working with NGS and bioinformatics tools will be a plus, especially GATK and WDL and common NGS data formats (VCF, BAM)
  • Experience working with cloud computing infrastructures will be a plus, especially on Amazon AWS and DNAnexus
  • Developing codebases using distributed version control tools (especially Git) and software issue tracking systems (especially Jira)
  • Excellent communication and interpersonal skills needed for working in an interdisciplinary team of scientists, engineers, and clinicians
  • Well-versed in the art of effective technical communication, especially graphical communication, about systems design and high-complexity datasets

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