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Bioinformatics Contract Jobs in California (NOW HIRING)

Aspen Neuroscience

Scientist I, Microglia

San Diego, CA · On-site

$108K - $133K/yr

Manage external academic collaborations and contract research activities, including study design ... Experience with iPSCs, microglia, in vivo disease modeling, gene editing, or bioinformatics is ...

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Bioinformatics Contract information

See California salary details

$58.7K

$93.2K

$147.5K

How much do bioinformatics contract jobs pay per year?

As of Sep 2, 2026, the average yearly pay for bioinformatics contract in California is $93,237.00, according to ZipRecruiter salary data. Most workers in this role earn between $66,600.00 and $127,800.00 per year, depending on experience, location, and employer.

What is a bioinformatics contract?

A Bioinformatics Contract job is a temporary or project-based position where professionals apply computational and statistical techniques to analyze biological data. These roles are commonly found in pharmaceutical companies, research institutions, and biotech firms. Contractors may work on tasks like genome sequencing analysis, algorithm development, or database management. The duration of contracts can vary from a few months to several years, depending on the project. This type of job offers flexibility but may not always include benefits like health insurance or long-term job security.

What are the typical day-to-day responsibilities of a bioinformatics contract?

As a Bioinformatics Contract professional, your daily tasks often include processing and analyzing large-scale biological data (such as genomics or proteomics datasets), writing and troubleshooting scripts, and interpreting your findings for research or clinical applications. You may also be tasked with maintaining and optimizing computational pipelines, preparing reports or visualizations of results for project teams, and meeting tight project deadlines. Collaboration is common, whether it's working with biologists to understand experimental needs or partnering with software engineers to improve data workflows. The work environment for contract professionals is usually dynamic, requiring adaptability as project priorities shift or new datasets become available. These responsibilities help organizations accelerate discovery and decision-making in fields like biotechnology, pharmaceuticals, and academia.

What are the key skills and qualifications needed to thrive in a bioinformatics contract, and why are they important?

To thrive as a Bioinformatics Contract professional, you need strong expertise in computational biology, data analysis, and a relevant scientific background, such as bioinformatics, computer science, or molecular biology. Proficiency with specialized tools like Python, R, Linux, and bioinformatics databases and pipelines is typically expected, along with familiarity with version control systems and cloud computing platforms. Strong problem-solving abilities, attention to detail, and clear communication are essential soft skills in this role. These skills enable effective analysis, collaboration with multidisciplinary teams, and delivery of impactful research outcomes in a fast-paced, project-based environment.

What are the most commonly searched types of Bioinformatics jobs in California?

The most popular types of Bioinformatics jobs in California are:

What are popular job titles related to Bioinformatics Contract jobs in California?

For Bioinformatics Contract jobs in California, the most frequently searched job titles are:

What job categories do people searching Bioinformatics Contract jobs in California look for?

The top searched job categories for Bioinformatics Contract jobs in California are:

What cities in California are hiring for Bioinformatics Contract jobs?

Cities in California with the most Bioinformatics Contract job openings:

Bioinformatics Contract jobs near you
Infographic showing various Bioinformatics Contract job openings in California as of August 2026, with employment types broken down into 83% Full Time, 15% Part Time, and 2% Contract. Highlights an 73% Physical, 4% Hybrid, and 23% Remote job distribution, with an average salary of $93,237 per year, or $44.8 per hour.

Medical Data Specialist II - Medical Device (Hybrid - Valencia, CA) Contract

Pharmavise

Valencia, CA • On-site

Contractor

Re-posted 17 days ago

Job description


Our Fortune 500 Medical Device client has an exciting opportunity for a Medical Data Specialist II.
Job Summary:
Designs, builds and manages the information or big data infrastructure. Develops the architecture that helps analyze and process data in the way the organization needs it. Makes sure those systems are performing smoothly.
Key Responsibilities:
• Provides technical guidance related to data architecture, data models and meta data management to senior IT and business leaders.
• Defines and implements data flows through and around digital products.
• Participates in data modeling and testing.
• Extracts relevant data to solve analytical problems; ensure development teams have the required data.
• Interacts with the business divisions to understand all data requirements to develop business insights for CRM and translates them into data structures and data model requirements to IT.
• Works closely with database teams on topics related to data requirements, cleanliness, accuracy etc.
• Tracks analytics impact on business.
• Monitors market watch.
• Develops sustainable data driven solutions with current new gen data technologies to meet the needs of the organization and business customers.
• Builds data pipeline frameworks to automate high-volume and real-time data delivery for Hadoop and streaming data hub.
• Builds robust systems with an eye on the long-term maintenance and support of the application.
• Builds data APIs and data delivery services that support critical operational and analytical applications for our internal business operations, customers and partners.
• Transforms complex analytical models into scalable, production-ready solutions.
• Continuously integrates and ships code into our own premise and cloud production environments.
• Develops applications from ground up using a modern technology stack such as Scala, Spark, Postgres, Angular JS, and NoSQL.
• Works directly with Product Managers and customers to deliver data products in a collaborative and agile environment.
Education & Experience:
- Bachelor's or master's degree in computer science, Engineering, Bioinformatics, or related field.
- 5+ years of experience in data engineering. Firm.
- Prefer prior experience working with regulated healthcare data (e.g., HIPAA, FDA 21 CFR Part 11)
Core Technical Skills required:
- ETL Development: Proficiency in building robust pipelines.
- Data Modeling: Strong knowledge of relational (PostgreSQL, MySQL) and NoSQL (MongoDB, DynamoDB) data models, especially clinical or device data schemas (FHIR, HL7, OMOP).
- Cloud Platforms: Experience with HIPAA-compliant cloud services.
- Programming: Strong Python and SQL skills; Spark or Scala is a plus.
- APIs & Integration: RESTful APIs, HL7/FHIR data ingestion, integration with EHRs and medical devices.
- Experience in Python, AWS Glue, AWS EMR, AWS S3, AWS Lambda, AWS ECS.
-Experience in one of the following: Flink, Kafka, Spark, Terraform
Other Details:
Schedule: 06:00:AM - 02:30:PM with some flexibility with start/end times
Work Setup: HYBRID - 3 days onsite in Valencia, CA
Contract Length: 12 Months (11/17/2025 - 11/16/2026)

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