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Bioinformatic Engineer information

See Baltimore, MD salary details

$32.8K

$88.6K

$141.1K

How much do bioinformatic engineer jobs pay per year?

As of Aug 6, 2026, the average yearly pay for bioinformatic engineer in Baltimore, MD is $88,616.00, according to ZipRecruiter salary data. Most workers in this role earn between $66,100.00 and $108,300.00 per year, depending on experience, location, and employer.

What is the difference between Bioinformatic Engineer vs Bioinformatics Analyst?

AspectBioinformatic EngineerBioinformatics Analyst
Required CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fieldsBachelor's or Master's in Bioinformatics, Biology, or related fields
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, healthcare, pharmaceutical companies
Employer & Industry UsageDevelops tools, pipelines, and software for biological data analysisAnalyzes biological data, interprets results, and reports findings

While both roles involve biological data, Bioinformatic Engineers focus on developing computational tools and pipelines, whereas Bioinformatics Analysts primarily interpret data and generate insights. Both positions require similar educational backgrounds and are vital in research and healthcare settings, but their core responsibilities differ in development versus analysis.

What are common challenges faced by bioinformatic engineers when working with large-scale genomic data?

Bioinformatic Engineers often encounter challenges related to managing and processing vast amounts of genomic data, which can require significant computational resources and efficient data handling strategies. Ensuring data integrity, reproducibility of analyses, and effective collaboration with multidisciplinary teams of biologists, statisticians, and software developers are also key aspects of the role. Staying updated with the latest bioinformatics tools and pipelines is essential, as the field evolves rapidly. Overcoming these challenges requires strong problem-solving skills, attention to detail, and the ability to communicate complex findings to non-technical stakeholders.

What skills and qualifications are needed to thrive as a bioinformatic engineer?

To thrive as a Bioinformatic Engineer, you need a strong background in computational biology, programming (such as Python or R), statistics, and a relevant degree in bioinformatics, computer science, or a related field. Familiarity with bioinformatics tools (like BLAST, GATK, or Bioconductor), data analysis platforms, and experience with databases such as SQL are typically required. Strong problem-solving abilities, attention to detail, and effective communication skills help you interpret complex data and collaborate with multidisciplinary teams. These skills are essential for accurately analyzing biological data, deriving meaningful insights, and facilitating research or clinical advancements.

What is a bioinformatic engineer?

Bioinformatic Engineers are professionals who develop and apply computational tools and techniques to analyze biological data, such as DNA sequences, protein structures, and genetic information. They combine expertise in computer science, biology, and mathematics to process large datasets generated by modern biological experiments. Their work supports research in areas like genomics, drug discovery, and personalized medicine by helping scientists make sense of complex biological data.
What are popular job titles related to Bioinformatic Engineer jobs in Baltimore, MD? For Bioinformatic Engineer jobs in Baltimore, MD, the most frequently searched job titles are:
What job categories do people searching Bioinformatic Engineer jobs in Baltimore, MD look for? The top searched job categories for Bioinformatic Engineer jobs in Baltimore, MD are:
What cities near Baltimore, MD are hiring for Bioinformatic Engineer jobs? Cities near Baltimore, MD with the most Bioinformatic Engineer job openings:
Bioinformatic Engineer jobs near you
Infographic showing various Bioinformatic Engineer job openings in Baltimore, MD as of June 2026, with employment types broken down into 73% Full Time, 18% Part Time, and 9% Contract. Highlights an 94% Physical, 1% Hybrid, and 5% Remote job distribution, with an average salary of $88,616 per year, or $42.6 per hour.

Bioinformatics Engineer (Hybrid)

Quest Diagnostics

Baltimore, MD • On-site

$95K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 24 days ago

ExamOne rating

6.6

Company rating: 6.6 out of 10

Based on 9 frontline employees who took The Breakroom Quiz

97th of 120 rated laboratories

Job description


Pay Range: $95,000.00 - $125,000.00 / year
Salary offers are based on a wide range of factors including relevant skills, training, experience, education, and, where applicable, certifications obtained. Market and organizational factors are also considered. Successful candidates may be eligible to receive annual performance bonus compensation.
Benefits Information:
We are proud to offer best-in-class benefits and programs to support employees and their families in living healthy, happy lives. Our pay and benefit plans have been designed to promote employee health in all respects - physical, financial, and developmental. Depending on whether it is a part-time or full-time position, some of the benefits offered may include:
• Day 1 Medical, supplemental health, dental & vision for FT employees who work 30+ hours
• Best-in-class well-being programs
• Annual, no-cost health assessment program Blueprint for Wellness®
• healthyMINDS mental health program
• Vacation and Health/Flex Time
• 6 Holidays plus 1 "MyDay" off
• FinFit financial coaching and services
• 401(k) pre-tax and/or Roth IRA with company match up to 5% after 12 months of service
• Employee stock purchase plan
• Life and disability insurance, plus buy-up option
• Flexible Spending Accounts
• Annual incentive plans
• Matching gifts program
• Education assistance through MyQuest for Education
• Career advancement opportunities
• and so much more!
About Haystack Oncology
Haystack Oncology, now part of Quest Diagnostics, is a next-generation liquid biopsy company focused on advancing tumor-informed minimal residual disease (MRD) testing. Our proprietary technology enables highly sensitive and specific detection of circulating tumor DNA (ctDNA), improving patient outcomes through earlier detection of residual disease.
As we continue to expand our assay portfolio and bring cutting-edge diagnostics to the public, we are seeking a skilled Bioinformatics Scientist to join our growing team. This role will play a critical part in supporting clinical production testing, clinical trials, and assay R&D for Quest Diagnostics laboratories in the US and Europe.
Role Overview
As a Bioinformatics Scientist, you will develop and maintain cloud-based computational infrastructure for the analysis of genomic data from our proprietary MRD assays. You will work cross-functionally with laboratory, LIMS, and IT teams to ensure seamless integration of bioinformatics workflows with clinical and research operations.
Responsibilities
  • Develop & maintain cloud infrastructure for scalable and efficient genomic data analysis.
  • Implement and optimize Python and Nextflow bioinformatics workflows.
  • Integrate bioinformatics pipelines with Laboratory Information Management Systems (LIMS) to streamline data processing.
  • Ensure compliance with IT security and privacy controls, aligning with Quest Diagnostics' corporate policies.
  • Apply software engineering best practices, contributing to the scalability, robustness, and maintainability of bioinformatics pipelines.
  • Develop and manage databases and applications for quality control (QC) and assay performance monitoring.
  • Document and validate bioinformatics systems in compliance with regulatory and quality standards for clinical diagnostics

Qualifications
Required:
  • Background in software or infrastructure engineering, with experience in bioinformatics.
  • Proficiency in bioinformatics pipeline workflow management, particularly Nextflow (preferred), Cromwell, or CWL.
  • Hands-on experience developing cloud-native infrastructure (AWS preferred) for storage, batch computing, and serverless applications.
  • Expertise in infrastructure as code (IaC) technologies such as Terraform or AWS CDK.
  • Strong programming skills in Python, JavaScript/TypeScript, R, or other relevant scripting languages.
  • Experience with API development and integration, particularly JSON-based RESTful APIs.
  • Deep understanding of version control (Git), CI/CD best practices, and software development lifecycle (SDLC).
  • Ability to work cross-functionally in a multi-disciplinary environment with minimal supervision.
  • Strong problem-solving, analytical, and troubleshooting skills, with the ability to diagnose and resolve technical issues.
  • Excellent verbal and written communication skills in English, with the ability to translate technical concepts for non-technical stakeholders.

Preferred:
  • Experience in a clinical diagnostics or regulated environment (e.g., CLIA, CAP, IVDR, FDA) with knowledge of software validation and regulatory requirements.
  • Understanding of controlled processes, environment management, and quality control systems in a clinical setting.
  • Familiarity with DevOps methodologies.

Education:
  • Bachelor's Degree (Required)
  • Master's Degree (Preferred

About the Team
Quest Diagnostics honors our service members and encourages veterans to apply.
While we appreciate and value our staffing partners, we do not accept unsolicited resumes from agencies. Quest will not be responsible for paying agency fees for any individual as to whom an agency has sent an unsolicited resume.
Equal Opportunity Employer: Race/Color/Sex/Sexual Orientation/Gender Identity/Religion/National Origin/Disability/Vets or any other legally protected status.

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