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Automation Engineer Jobs in Natick, MA (NOW HIRING)

Vertex Pharmaceuticals

Lab Automation Engineer

Boston, MA · On-site

$85K - $128K/yr

The Lab Automation Engineer will be a part of a team dedicated to designing, implementing, and validating automation solutions, across various automation platforms (Hamilton/Biomek/etc.), with a ...

Genezen

Automation Engineer I/II/III

Lexington, MA

The Automation Engineer is responsible for the administration of all facilities and process automation. JOB RESPONSIBILITIES * Provides automation support and troubleshooting services to Genezen ...

Genezen

Automation Engineer I/II/III

Lexington, MA · On-site

The Automation Engineer is responsible for the administration of all facilities and process automation. JOB RESPONSIBILITIES * Provides automation support and troubleshooting services to Genezen ...

RPM ReSearch

Laboratory Automation Engineer

Boston, MA

$100K/yr

We are looking for an Automation Engineer. Experience with Hamilton Liquid Handlers is preferred. The ideal candidate will have strong problem solving, debugging and documentation skill sets, as well ...

Wilmerhale

AI Automation Engineer

Boston, MA · On-site

What You Will Be Doing The Automation Engineer is responsible for leading the design, implementation, and maintenance of automated and AI based solutions to improve legal workflows. This role ...

Takeda

Principal Automation Engineer

Lexington, MA · On-site

$159K - $242K/yr

Principal Automation Engineer POSITION DESCRIPTION : Shire Human Genetic Therapies, Inc. is seeking a Principal Automation Engineer with the following duties: responsible for operational, project ...

Stellix

Automation Engineer III

Foxboro, MA · On-site

Engineers leverage their expertise and knowledge of process control systems and automation across multiple process industries. SUMMARY - The Role We are currently looking for a Process Automation ...

VideaHealth

Test Automation Engineer

Boston, MA · On-site

$115K - $130K/yr

Test Automation Engineer Location: Boston, MA Less complexity. More dentistry. More impact. At Videa, we help dental clinicians deliver better care to millions of patients through AI. Oral health is ...

Stellix

Automation Engineer III

Foxboro, MA

Engineers leverage their expertise and knowledge of process control systems and automation across multiple process industries. SUMMARY - The Role We are currently looking for a Process Automation ...

E Tech Group

Senior Automation Engineer

Boston, MA

$113K - $148K/yr

The Senior Automation Engineer role requires an individual have a diverse engineering skill set with the ability to work independently to perform all aspects of process automation engineering and ...

E Tech Group

Senior Automation Engineer

Norton, MA

$105K - $138K/yr

The Senior Automation Engineer role requires an individual have a diverse engineering skill set with the ability to work independently to perform all aspects of process automation engineering and ...

E Tech Group

Senior Automation Engineer

Norton, MA · On-site

$105K - $138K/yr

The Senior Automation Engineer role requires an individual have a diverse engineering skill set with the ability to work independently to perform all aspects of process automation engineering and ...

E Tech Group

Senior Automation Engineer

Norton, MA

$105K - $138K/yr

The Senior Automation Engineer role requires an individual have a diverse engineering skill set with the ability to work independently to perform all aspects of process automation engineering and ...

E Tech Group

Senior Automation Engineer

Andover, MA

$105K - $138K/yr

The Senior Automation Engineer role requires an individual have a diverse engineering skill set with the ability to work independently to perform all aspects of process automation engineering and ...

WilmerHale

AI Automation Engineer

Boston, MA · On-site

$135K - $168K/yr

What You Will Be Doing The Automation Engineer is responsible for leading the design, implementation, and maintenance of automated and AI based solutions to improve legal workflows. This role ...

TekCommands Inc

Rockwell Automation Engineer

Norton, MA · On-site

Senior Automation Engineer with hands-on Rockwell Technologies, specifically on Rockwell PLCs, FactoryTalk View Studio, FactoryTalk View SE, and FactoryTalk Batch. Important to have Life Sciences GMP ...

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Showing results 21-40

All JobsAutomation Engineer JobsAutomation Engineer Jobs in Natick, MA

Automation Engineer information

See Natick, MA salary details

$38.2K

$110.6K

$168.3K

How much do automation engineer jobs pay per year?

As of Aug 7, 2026, the average yearly pay for automation engineer in Natick, MA is $110,595.00, according to ZipRecruiter salary data. Most workers in this role earn between $89,300.00 and $127,500.00 per year, depending on experience, location, and employer.

What is the difference between Automation Engineer vs Control Systems Engineer?

AspectAutomation EngineerControl Systems Engineer
Required CredentialsBachelor's in Engineering, certifications like PLC or SCADABachelor's in Electrical, Mechanical, or Systems Engineering, similar certifications
Work EnvironmentManufacturing, industrial plants, automation companiesIndustrial facilities, manufacturing, process control environments
Employer & Industry UsageTech firms, manufacturing, automation service providersIndustrial sectors, process industries, automation firms
Common Search & Comparison IntentYesYes

The main difference between Automation Engineers and Control Systems Engineers lies in their focus areas. Automation Engineers typically design and implement automated systems across various industries, emphasizing software and hardware integration. Control Systems Engineers concentrate on designing and maintaining control systems for industrial processes, often with a stronger emphasis on control theory and hardware. Both roles require similar qualifications and are often found working in manufacturing and industrial environments, but their specific responsibilities and focus areas differ.

What is an automation engineer?

Automation Engineers are professionals who design, develop, and implement automated systems and processes to improve efficiency, quality, and productivity in various industries. They work with technologies such as robotics, control systems, and software to automate repetitive or complex tasks. Their responsibilities often include programming, troubleshooting, and maintaining automation equipment, as well as collaborating with other engineers to optimize workflows. Automation Engineers are employed in sectors like manufacturing, IT, automotive, and pharmaceuticals.

What are the key skills and qualifications needed to thrive as an automation engineer, and why are they important?

To thrive as an Automation Engineer, you need a strong grasp of control systems, programming (such as PLC, Python, or C++), and a relevant engineering degree. Familiarity with automation platforms like Rockwell, Siemens, or SCADA systems, as well as certifications like ISA or relevant vendor-specific credentials, is highly valued. Analytical thinking, problem-solving, and effective communication are essential soft skills for collaborating with diverse teams and troubleshooting complex issues. These skills and qualifications are critical for designing efficient automated solutions, minimizing downtime, and ensuring seamless integration of systems.

What are some common challenges automation engineers face when integrating new systems into existing workflows?

Automation Engineers often encounter challenges when integrating new automation solutions with legacy systems, including compatibility issues and data migration complexities. Coordinating with cross-functional teams—such as IT, operations, and production—can require extensive communication to ensure seamless implementation. Additionally, balancing the need for system reliability with innovation and minimizing downtime during transitions are key concerns. Proactively addressing these challenges through thorough planning and testing helps ensure successful integration.

What does an automation engineer do?

As an automation engineer, your job is to design and develop automated machines for your company. Your responsibilities may include determining the best way to implement automation, creating devices that meet the company's needs and specifications, testing robots to ensure they perform as designed, and monitoring existing automation to check if repair or replacement is needed. Many duties of this job vary by industry. For example, automation engineers work in areas like the automotive industry, food preparation and packaging, electronics production, and appliance production, and each of these fields has different materials and objectives. However, regardless of industry, most automation engineers work with both hardware and software.

More about Automation Engineer jobs
What job categories do people searching Automation Engineer jobs in Natick, MA look for? The top searched job categories for Automation Engineer jobs in Natick, MA are:
What cities near Natick, MA are hiring for Automation Engineer jobs? Cities near Natick, MA with the most Automation Engineer job openings:
Automation Engineer jobs near you
Infographic showing various Automation Engineer job openings in Natick, MA as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $110,595 per year, or $53.2 per hour.

Lab Automation Engineer

Vertex Pharmaceuticals

Boston, MA • On-site

$85K - $128K/yr

Full-time

Medical, Dental, Vision, Retirement, PTO

Posted 7 days ago

Vertex Pharmaceuticals rating

6.5

Company rating: 6.5 out of 10

Based on 5 frontline employees who took The Breakroom Quiz

78th of 86 rated pharmaceutical

Job description

Job Description
The Lab Automation Engineer will be a part of a team dedicated to designing, implementing, and validating automation solutions, across various automation platforms (Hamilton/Biomek/etc.), with a moderate degree of supervision. This role will support multiple disease areas and advance automation capabilities within Vertex Cell & Genetic Therapies. This role will develop an understanding of the research and development processes in order to establish new capabilities and improve efficiencies through automation enhancements.
This is an onsite position at our Leiden Center research site in Boston.
Key Duties and Responsibilities:
  • Translates manual research and development processes into the design of automation systems.
  • Troubleshoots standard system problems by analyzing information to make judgments; documents identified solutions.
  • Supports daily operations, commissioning, and validation activities while working in cross-functional teams.
  • Works to identify continuous improvement opportunities and participates in driving them from conception through implementation.
  • Participates in automation design for both continuous and batch processes.
  • Provide technical guidance in the operation of the automation system and participates in the advancement of current automation capabilities and the design and implementation of new automation capabilities.
  • Complies with all relevant safety and GMP procedures.

Knowledge and Skills:
  • Utilizing Hamilton and Biomek automation programming, method development, and general maintenance
  • Scheduling software for integrated automation work cells
  • Method development, optimization, and deployment of both highthroughput cell-based and biochemical assays
  • Working with automated data capture software
  • Some experience with common scripting languages (i.e., Python, R, C, C++) and basic familiarity with SQL databases.
  • Familiarity with version control tools such as Git, and experience with CI/CD pipelines and automated deployment practices preferred
  • Assisting large matrix technical teams to reach successful outcomes under accelerated timelines across broad disease areas and therapeutic modalities
  • Experience of being part of large matrix technical teams to reach successful outcomes under accelerated timelines.
  • Written and verbal communication skills to exchange straight forward information and confirm understanding

Education and Experience:
  • Typically requires a Bachelor's Degree in chemical engineering, computer sciences or related field and 1 years experience in life sciences, engineering or academia

#LI-KM1
#LI-Onsite
Pay Range:
$85,600 - $128,400
Disclosure Statement:
The range provided is based on what we believe is a reasonable estimate for the base salary pay range for this job at the time of posting. This role is eligible for an annual bonus and annual equity awards. Some roles may also be eligible for overtime pay, in accordance with federal and state requirements. Actual base salary pay will be based on a number of factors, including skills, competencies, experience, and other job-related factors permitted by law.
At Vertex, our Total Rewards offerings also include inclusive market-leading benefits to meet our employees wherever they are in their career, financial, family and wellbeing journey while providing flexibility and resources to support their growth and aspirations. From medical, dental and vision benefits to generous paid time off (including a week-long company shutdown in the Summer and the Winter), educational assistance programs including student loan repayment, a generous commuting subsidy, matching charitable donations, 401(k) and so much more.
Flex Designation:
On-Site Designated
Flex Eligibility Status:
In this On-Site designated role, you will work five days per week on-site with ad hoc flexibility.
Note: The Flex status for this position is subject to Vertex's Policy on Flex @ Vertex Program and may be changed at any time.
#LI-Onsite
Company Information
Vertex is a global biotechnology company that invests in scientific innovation.
Vertex is committed to equal employment opportunity and non-discrimination for all employees and qualified applicants without regard to a person's race, color, sex, gender identity or expression, age, religion, national origin, ancestry, ethnicity, disability, veteran status, genetic information, sexual orientation, marital status, or any characteristic protected under applicable law. Vertex is an E-Verify Employer in the United States. Vertex will make reasonable accommodations for qualified individuals with known disabilities, in accordance with applicable law.
Any applicant requiring an accommodation in connection with the hiring process and/or to perform the essential functions of the position for which the applicant has applied should make a request to the recruiter or hiring manager, or contact Talent Acquisition at ApplicationAssistance@vrtx.com

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