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Watershed Engineer Jobs (NOW HIRING)

Software Engineer, UI

Boston, MA ยท On-site

$113K - $151K/yr

About Watershed Our vision is to become the leading biocomputing platform. The future of biology is ... We have attracted some of the best bioinformatics, engineering, and commercial talent, and we are ...

Infrastructure Engineer

Cambridge, MA ยท On-site

$118K - $155K/yr

Watershed Bio is on a mission to accelerate digital drug discovery with their biocomputing platform. The Infrastructure Engineer will design and manage high-performance computing infrastructure to ...

Infrastructure Engineer

Cambridge, MA ยท On-site

$118K - $155K/yr

Watershed Bio is a leading biocomputing platform focused on accelerating digital drug discovery through big data analysis. They are seeking an Infrastructure Engineer to design and manage high ...

Site Reliability Engineer

Cambridge, MA ยท On-site

$62.75 - $83.50/hr

Watershed Bio is on a mission to accelerate digital drug discovery with their biocomputing platform. The Site Reliability Engineer will be responsible for engineering infrastructure to support high ...

Showing results 41-60

Watershed Engineer information

See salary details

$42K

$94.9K

$155K

How much do watershed engineer jobs pay per year?

As of Sep 9, 2026, the average yearly pay for watershed engineer in the United States is $94,924.00, according to ZipRecruiter salary data. Most workers in this role earn between $80,000.00 and $108,000.00 per year, depending on experience, location, and employer.

What is the difference between Watershed Engineer vs Hydrologist?

AspectWatershed EngineerHydrologist
Required CredentialsBachelor's in Civil, Environmental Engineering or related field; Professional Engineer (PE) license often preferredBachelor's or Master's in Hydrology, Geology, or Environmental Science; often requires relevant certifications
Work EnvironmentDesigning and implementing watershed management projects, fieldwork, collaboration with engineers and agenciesResearch, data analysis, modeling, often in labs or offices, field data collection
Employer & Industry UsageGovernment agencies, consulting firms, environmental organizationsResearch institutions, government agencies, environmental consulting

Watershed Engineers focus on designing solutions for watershed management, infrastructure, and environmental protection, often working on projects that require engineering expertise. Hydrologists primarily analyze water systems, conduct research, and develop models to understand water flow and quality. While both roles involve water and environmental science, Watershed Engineers are more project and design-oriented, whereas Hydrologists focus on research and data analysis.

What are popular job titles related to Watershed Engineer jobs?

For Watershed Engineer jobs, the most frequently searched job titles are:

Infographic showing various Watershed Engineer job openings in the United States as of September 2026, with employment types broken down into 1% Internship, 92% Full Time, 3% Part Time, and 4% Contract. Highlights an 85% Physical, 4% Hybrid, and 11% Remote job distribution, with an average salary of $94,924 per year, or $45.6 per hour.

High Performance Computing Engineer

Boston, MA โ€ข On-site

Watershed Informatics
Biotechnology Research and Developmentย โ€ขย 1 - 10 employees

Full-time

Re-posted 13 days ago


Job description

About Watershed

Our vision is to become the leading biocomputing platform. The future of biology is in big data analysis, and we are on a mission to accelerate digital drug discovery with the Watershed platform.ย Watershed enables scientists to conduct all essential analysis - from lab data to plot - with a single software platform.ย 

We have attracted some of the best bioinformatics, engineering, and commercial talent, and we are growing! Join a team that's intellectually curious with a bias for action, headquartered in Cambridge, Massachusetts, composed of people who have come together to enable outcomes while empowering the research of all those committed to changing lives - all while bringing transformational change to a $40 billion industry.

Responsibilities
  • Integrate software libraries and cluster computing frameworks into high performance applications
  • Develop solutions for benchmarking, metric collection, and monitoring of resources
  • Collaborate with software engineers to optimizing software and maximize computational throughput
Qualifications
  • Experience in all of the following areas: parallel computing, distributed computing, computer architecture, and software optimization
  • Programming experience in Python, C/C++, and Bash
  • Experience working with Unix/Linux, containerization, and cloud environments
  • Familiarity with networking, security, and the Linux operating system
  • Ability to analyze very complex problems and come up with novel solutions

Watershed is an equal-opportunity employer and believes diversity of all types is integral to company success. We do not discriminate on the basis of religion, sexual orientation, gender identity, race, ethnicity, national origin, marital status, veteran status, or disability status.