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Variant Scientist Jobs in Boston, MA (NOW HIRING)

... variant configuration models in SAP S/4HANA that enable accurate product quoting in SAP CPQ. This ... Bachelor's degree in Engineering, Computer Science, Information Systems, or related field. * 5+ ...

... variant configuration models in SAP S/4HANA that enable accurate product quoting in SAP CPQ. This ... Bachelor's degree in Engineering, Computer Science, Information Systems, or related field. * 5+ ...

... variant configuration models in SAP S/4HANA that enable accurate product quoting in SAP CPQ. This ... Bachelor's degree in Engineering, Computer Science, Information Systems, or related field. * 5+ ...

PACB) is a premier life science technology company that designs, develops, and manufactures ... Knowledge of secondary and tertiary genomic analysis, variant interpretation, and clinical ...

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Variant Scientist information

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$86

How much do variant scientist jobs pay per hour?

As of Sep 7, 2026, the average hourly pay for variant scientist in Boston, MA is $50.37, according to ZipRecruiter salary data. Most workers in this role earn between $36.54 and $63.82 per hour, depending on experience, location, and employer.

What is a variant scientist?

Variant Scientists are professionals who analyze genetic variants—differences in DNA sequences—to determine their significance in health and disease. They interpret genomic data, often from whole-genome or exome sequencing, to assess whether specific variants may cause or contribute to medical conditions. Their work is crucial in clinical genetics, precision medicine, and biomedical research, helping guide patient diagnosis and treatment. Variant Scientists collaborate with clinicians, bioinformaticians, and laboratory personnel to provide accurate and actionable genetic insights.

What does a variant scientist do?

As a variant scientist, you work for a research laboratory in a university or a medical facility to test and study variations of genes and the effects they have on human development. As part of your duties, you aid in the development of new tests to discover gene abnormalities, perform analysis on patient samples to identify possible mutations, and record your findings to assist in scientific research. You also have heavy reporting responsibilities that may require in-depth computer and writing skills, the ability to analyze data, and strong attention to detail. In this role, you may cater to a specific health field, like pediatrics or oncology.

What are the key skills and qualifications needed to thrive as a variant scientist, and why are they important?

To thrive as a Variant Scientist, you need a solid background in genetics, molecular biology, and bioinformatics, typically supported by an advanced degree such as a PhD or MSc in a related field. Familiarity with next-generation sequencing (NGS) platforms, variant annotation tools, and data analysis software like GATK or ANNOVAR is essential. Strong analytical thinking, attention to detail, and effective communication skills help you interpret complex genetic data and collaborate with multidisciplinary teams. These skills ensure accurate variant interpretation, drive discoveries, and support precision medicine initiatives.

What are some common challenges faced by variant scientists in interpreting genetic data, and how are these typically addressed within a team?

Variant Scientists often encounter challenges such as distinguishing between benign and pathogenic variants, managing large volumes of sequencing data, and staying updated with rapidly evolving genetic databases. These challenges are typically addressed by collaborating closely with bioinformaticians, clinical geneticists, and laboratory personnel to review findings and validate interpretations. Regular team meetings, use of standardized classification guidelines like ACMG, and leveraging advanced software tools help ensure accurate and consistent variant analysis.

What are the most commonly searched types of Variant Scientist jobs in Boston, MA?

The most popular types of Variant Scientist jobs in Boston, MA are:

What are popular job titles related to Variant Scientist jobs in Boston, MA?

For Variant Scientist jobs in Boston, MA, the most frequently searched job titles are:

What job categories do people searching Variant Scientist jobs in Boston, MA look for?

The top searched job categories for Variant Scientist jobs in Boston, MA are:

Infographic showing various Variant Scientist job openings in Boston, MA as of August 2026, with employment types broken down into 1% Internship, 1% As Needed, 88% Full Time, 6% Part Time, and 4% Contract. Highlights an 89% Physical, 3% Hybrid, and 8% Remote job distribution, with an average salary of $104,768 per year, or $50.4 per hour.

Human Genetics Laboratory Leader

Novartis Group Companies

Cambridge, MA • On-site

$152K - $283K/yr

Other

Medical, Life, Retirement, PTO

Re-posted 3 days ago


Job description

Job Description Summary

We are seeking a highly motivated and experienced scientist to lead a Human Genetics laboratory. You will drive the translation of human genetic insights into actionable biological hypotheses to enable target discovery and validation across disease areas. The successful candidate will lead a small team of biologists and shape the genotype-to-phenotype translation strategy, integrating rare variant genetics, functional biology, and advanced analytical approaches to inform target prioritization.
This position is part of the Human Genetics & Targets group within the Discovery Sciences (DSc) department in Biomedical Research at Novartis. The Human Genetics & Targets team is a global group of computational and experimental scientists dedicated to validating or invalidating genetics-driven target hypotheses. The team's extensive expertise in genetics analytics, biology, and translatable models is enhanced by DSc's capabilities in AI, functional genomics, chemical biology, and more. The team collaborates with disease area specialists to not only identify disease associations but fully understand the underlying disease mechanisms and advance drug discovery projects to benefit patients in need.


Job Description

Internal Job Title: Senior Principal Scientist or Associate Director

Position Location: Cambridge, MA, onsite #LI-onsite

Key responsibilities:

  • Lead and develop a high-performing team of 2-3 wet lab scientists, establishing state-of-the-art experimental capabilities to functionally characterize human genetic variation

  • Manage resources, priorities, and execution across multiple projects, ensuring high-quality data generation, interpretation, and delivery aligned with strategic goals

  • Apply genetics expertise to enable recall-by-genotype strategies, including participant identification from biobank resources and design of deep phenotyping protocols

  • Serve as senior scientific leader to evolve the genotype-to-phenotype research strategy, translating rare variants into biological hypotheses and target investment decisions

  • Represent genetics expertise in cross-functional teams and governance boards, contributing to portfolio prioritization alongside computational biology and disease area experts

  • Build and maintain strong internal and external partnerships, communicating scientific insights effectively to diverse audiences

Essential Requirements:

  • PhD with 8+ years of post-graduate experience in genetics, with a focus on rare variants and/or genotype-to-phenotype translation

  • Strong background in experimental biology, including cellular models and gene perturbation technologies relevant to variant characterization

  • Extensive experience connecting clinical and/or biobank genetic data to biological mechanisms and therapeutic hypotheses across disease indications

  • Proven people leadership skills, including mentoring and developing scientists, with the ability to influence cross-functional teams in a matrix environment

  • Curiosity for emerging technologies and methods, including AI-based approaches for variant interpretation and prioritization

  • Exceptional collaboration, communication, and problem-solving skills, with a strong track record of scientific innovation

Desirable Requirements:

  • Hands-on experience in designing and executing recall-by-genotype studies

  • Target and/or drug discovery experience in an industry setting

The salary for this position is expected to range between $138,600 and $257,400 USD annually for Senior Principal Scientist, and $152,600 and $283,400 USD annually for Associate Director. The final salary offered is determined based on factors like, but not limited to, relevant skills andexperience, and upon joining Novartis will be reviewed periodically. Novartis may change the publishedsalary range based on company and market factors.


Your compensation will include a performance-based cash incentive and, depending on the level of therole, eligibility to be considered for annual equity awards.


US-based eligible employees will receive a comprehensive benefits package that includes health, life anddisability benefits, a 401(k) with company contribution and match, and a variety of other benefits. Inaddition, employees are eligible for a generous time off package including vacation, personal days,holidays and other leaves.


To learn more about the culture, rewards and benefits we offer our people click here.


EEO Statement:

The Novartis Group of Companies are Equal Opportunity Employers. We do not discriminate in recruitment, hiring, training, promotion or other employment practices for reasons of race, color, religion, sex, national origin, age, sexual orientation, gender identity or expression, marital or veteran status, disability, or any other legally protected status.


Accessibility and reasonable accommodations

The Novartis Group of Companies are committed to working with and providing reasonable accommodation to individuals with disabilities. If, because of a medical condition or disability, you need a reasonable accommodation for any part of the application process, or to perform the essential functions of a position, please send an e-mail to us.reasonableaccommodations@novartis.com or call +1(877)395-2339 and let us know the nature of your request and your contact information. Please include the job requisition number in your message.


Salary Range

$138,600.00 - $257,400.00


Skills Desired

Analytical Thinking, Chemical Biology, Chemistry, Clinical Research, Clinical Trials, Collaboration, Curious Mindset, Data Analysis, Decision Making, Detail-Oriented, Drug Development, Ethics, Machine Learning (ML), Medical Research, Mentorship, Patient Care, Science, Stakeholder Engagement, Stakeholder Management