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Transcriptomics Jobs in Hercules, CA (NOW HIRING)

Valius Sciences

Computational Biologist

San Francisco, CA · On-site

$125K - $185K/yr

This coming year, we're on track to scale our patient volume significantly, all while bringing new diagnostic modalities (e.g., single-cell transcriptomics) and analytical approaches into clinical ...

Vivodyne

Senior Bioinformatician

San Francisco, CA

We are expanding our capabilities to generate high-throughput -omics data across automated human tissue models, with a primary focus on single-cell and bulk transcriptomics, secretomics, and ...

Blank Bio

Software Engineer

San Francisco, CA · On-site

... transcriptomics, RNA biology, or other -omics data. • Experience shipping software into regulated, security-sensitive, or air-gapped environments. • Previous work in an early-stage, fast-paced ...

Mithrl

Bioinformatics Engineer, Pipelines

San Francisco, CA · On-site

$150K - $200K/yr

These workflows include microarray, imaging, spatial transcriptomics, genomics, epigenomics, flow cytometry, and more. This role sits at the center of our technical stack. You will architect Nextflow ...

Vivodyne

Senior Bioinformatician

San Francisco, CA · On-site

We are expanding our capabilities to generate high-throughput -omics data across automated human tissue models, with a primary focus on single-cell and bulk transcriptomics, secretomics, and ...

Mithrl

Bioinformatics Engineer, Pipelines

San Francisco, CA · On-site

$150K - $200K/yr

These workflows include microarray, imaging, spatial transcriptomics, genomics, epigenomics, flow cytometry, and more. This role sits at the center of our technical stack. You will architect Nextflow ...

nudge

Histotechnologist

San Francisco, CA · On-site

Prepare and process samples for spatial omics platforms, including multiplexed protein imaging and spatial transcriptomics, with both RNA- and protein-based tagging approaches * Develop, optimize ...

Nudge

Histotechnologist

San Francisco, CA · On-site

Prepare and process samples for spatial omics platforms, including multiplexed protein imaging and spatial transcriptomics, with both RNA- and protein-based tagging approaches * Develop, optimize ...

Buck Institute

AI Data Scientist-Furman lab

Novato, CA · On-site

$60K - $75K/yr

Transcriptomics, including single-cell and bulk RNA-seq * Proteomics * Metabolomics * Epigenetics and biological aging clocks * Clinical and phenotypic datasets * Survey data * Integrative multi ...

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All JobsTranscriptomics JobsTranscriptomics Jobs in Hercules, CA

Transcriptomics information

See Hercules, CA salary details

$54.1K

$224.7K

$441.6K

How much do transcriptomics jobs pay per year?

As of Aug 4, 2026, the average yearly pay for transcriptomics in Hercules, CA is $224,652.00, according to ZipRecruiter salary data. Most workers in this role earn between $86,700.00 and $441,600.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a transcriptomics scientist, and why are they important?

To thrive as a Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree in a relevant field. Familiarity with next-generation sequencing (NGS) platforms, RNA-seq analysis pipelines, and programming languages like R or Python is essential. Attention to detail, problem-solving abilities, and effective communication skills set outstanding candidates apart. These competencies are vital for generating accurate transcriptomic data, interpreting complex results, and collaborating within multidisciplinary research teams.

What is transcriptomics?

Transcriptomics is the study of the complete set of RNA transcripts produced by the genome under specific circumstances or in a specific cell. It provides insights into gene expression patterns, how genes are regulated, and how cells respond to various conditions. By analyzing the transcriptome, researchers can better understand biological processes, disease mechanisms, and identify potential targets for therapy. Technologies such as RNA sequencing (RNA-seq) are commonly used in transcriptomics research.

What are some common challenges faced by professionals working in transcriptomics, and how can they be addressed?

Professionals in transcriptomics frequently encounter challenges such as handling large and complex datasets, ensuring data quality, and staying current with rapidly evolving analytical tools and technologies. Working closely with bioinformaticians and statisticians is essential for effective data analysis and interpretation. Additionally, clear communication and collaboration with wet-lab biologists and clinicians help bridge the gap between raw data and meaningful biological insights. Regular training and professional development can help transcriptomics professionals stay updated with the latest best practices and software advancements.

What is the difference between Transcriptomics vs Bioinformatics?

AspectTranscriptomicsBioinformatics
Required credentialsBachelor's or Master's in Biology, Genetics, or related fields; experience with sequencing technologiesBachelor's or Master's in Computer Science, Bioinformatics, or related fields; programming skills
Work environmentLaboratories, research institutions, biotech companiesResearch labs, biotech firms, academic institutions, data analysis centers
Industry usageGenomics, molecular biology, medical researchData analysis, software development, computational biology

While both Transcriptomics and Bioinformatics involve analyzing biological data, Transcriptomics focuses on studying gene expression profiles using sequencing technologies, whereas Bioinformatics encompasses a broader range of computational methods to analyze various biological datasets. Professionals in both fields often collaborate but have distinct skill sets and work environments.

What are popular job titles related to Transcriptomics jobs in Hercules, CA? For Transcriptomics jobs in Hercules, CA, the most frequently searched job titles are:
What job categories do people searching Transcriptomics jobs in Hercules, CA look for? The top searched job categories for Transcriptomics jobs in Hercules, CA are:
What cities near Hercules, CA are hiring for Transcriptomics jobs? Cities near Hercules, CA with the most Transcriptomics job openings:
Transcriptomics jobs near you
Infographic showing various Transcriptomics job openings in Hercules, CA as of June 2026, with employment types broken down into 95% Full Time, 3% Part Time, and 2% Contract. Highlights an 94% Physical, 3% Hybrid, and 3% Remote job distribution, with an average salary of $224,652 per year, or $108 per hour.

Computational Biologist

Valius Sciences

San Francisco, CA • On-site

$125K - $185K/yr

Full-time

Medical, Dental, Vision, Retirement

Re-posted 23 days ago

Job description

Valius overview
At Valius, we believe that the future of cancer care will be defined by "maximalist" diagnostics: deep, comprehensive assessments of DNA, RNA, and protein designed to give patients and their care teams the best possible understanding of how their tumor works and what its vulnerabilities are.
We're building the diagnostics and bioinformatics company to power this future, starting by applying this approach to patients with challenging cancers. In our first year, we worked with over 75 of these patients and, in many cases, identified plausible therapeutic targets which had not been discovered previously. This coming year, we're on track to scale our patient volume significantly, all while bringing new diagnostic modalities (e.g., single-cell transcriptomics) and analytical approaches into clinical care for the very first time.
We've just raised a $13.5M seed round, led by 8VC and Basis Set Ventures, and are looking for people passionate about changing cancer care to join our growing team.
Computational biologist role
We're hiring a computational biologist to analyze our patients' omics data. This role sits at the intersection of cutting-edge science and real-world clinical impact: you'll apply state-of-the-art omics techniques to complex patient datasets to deliver rigorous, actionable insights.
You'll have significant ownership from day one, including direct exposure to, and regular meetings with, the founding team. As we grow, you'll have the potential to develop into a broader scientific leadership role.
This role will be expected to work out of our beautiful San Francisco office four days a week.
What you'll do
  • Analyze multi-modal omics data. Apply cutting-edge techniques, including scRNAseq, spatial transcriptomics, and long-read sequencing, to derive meaningful insights from complex patient datasets.
  • Deliver patient-facing results. Translate computational findings into clear, rigorous outputs that directly inform treatment decisions for patients and their care teams.
  • Develop and maintain analytical pipelines. Build robust, reproducible workflows that scale with our growing patient programs.
  • Partner with the scientific and clinical teams. Collaborate closely with colleagues across disciplines to ensure analyses are well-designed, well-interpreted, and actionable.
  • Stay at the frontier. Continuously evaluate and incorporate emerging methods in omics and computational biology to keep Valius's science best-in-class.
  • Contribute across the company as needed. In a small team, you may pitch in on cross-functional initiatives as we scale.

What you'll bring
  • Deep fluency in omics analysis, including experience with techniques such as scRNAseq, spatial transcriptomics, or long-read sequencing
  • Strong programming skills in Python and/or R, with experience building reproducible analytical workflows (i.e., Snakemake, Nextflow, Git)
  • Proven ability to move quickly and deliver rigorous results in parallel
  • Clear communicator who can translate complex findings for both scientific and non-scientific audiences
  • High agency and ownership mindset with the ability to see analyses through to actionable conclusions
  • Excited to work in a fast-paced startup environment where flexibility and initiative are valued
  • Commitment to our patient-focused mission
  • Interest in working for a small, early-stage startup

Other nice to haves
  • Experience in oncology or translational research
  • Familiarity with cloud-based computing environments and large-scale data infrastructure
  • Interest in growing into a scientific leadership role as the company scales

What we'll bring
  • Competitive salary and equity compensation
  • Generous refresh grants
  • Comprehensive benefits (health, dental, vision, 401(k))
  • Genuine investment in your professional development

Fun, mission-driven team culture

Apply