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Transcriptomics Jobs in Boston, MA (NOW HIRING)

Bioinformatics Leader

Boston, MA · On-site

$200K - $229K/yr

Design and implement computational workflows for analysis of multi-omic data (genomics, transcriptomics, proteomics) in drug discovery and translational contexts * Translate complex biological ...

Familiarity with transcriptomics, metabolomics, proteomics, applications of artificial intelligence / machine learning tools to biology, or laboratory automation would be viewed favorably. What you ...

Clinical Data Manager

Burlington, MA · On-site

$145K - $160K/yr

We combine cutting-edge technologies including optogenetics, in vivo physiology, and spatial transcriptomics to identify novel drug targets and develop effective therapies to address psychiatric ...

Showing results 41-60

Transcriptomics information

See Boston, MA salary details

$53.2K

$221K

$434.6K

How much do transcriptomics jobs pay per year?

As of Aug 6, 2026, the average yearly pay for transcriptomics in Boston, MA is $221,048.00, according to ZipRecruiter salary data. Most workers in this role earn between $85,300.00 and $434,600.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a transcriptomics scientist, and why are they important?

To thrive as a Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree in a relevant field. Familiarity with next-generation sequencing (NGS) platforms, RNA-seq analysis pipelines, and programming languages like R or Python is essential. Attention to detail, problem-solving abilities, and effective communication skills set outstanding candidates apart. These competencies are vital for generating accurate transcriptomic data, interpreting complex results, and collaborating within multidisciplinary research teams.

What is transcriptomics?

Transcriptomics is the study of the complete set of RNA transcripts produced by the genome under specific circumstances or in a specific cell. It provides insights into gene expression patterns, how genes are regulated, and how cells respond to various conditions. By analyzing the transcriptome, researchers can better understand biological processes, disease mechanisms, and identify potential targets for therapy. Technologies such as RNA sequencing (RNA-seq) are commonly used in transcriptomics research.

What are some common challenges faced by professionals working in transcriptomics, and how can they be addressed?

Professionals in transcriptomics frequently encounter challenges such as handling large and complex datasets, ensuring data quality, and staying current with rapidly evolving analytical tools and technologies. Working closely with bioinformaticians and statisticians is essential for effective data analysis and interpretation. Additionally, clear communication and collaboration with wet-lab biologists and clinicians help bridge the gap between raw data and meaningful biological insights. Regular training and professional development can help transcriptomics professionals stay updated with the latest best practices and software advancements.

What is the difference between Transcriptomics vs Bioinformatics?

AspectTranscriptomicsBioinformatics
Required credentialsBachelor's or Master's in Biology, Genetics, or related fields; experience with sequencing technologiesBachelor's or Master's in Computer Science, Bioinformatics, or related fields; programming skills
Work environmentLaboratories, research institutions, biotech companiesResearch labs, biotech firms, academic institutions, data analysis centers
Industry usageGenomics, molecular biology, medical researchData analysis, software development, computational biology

While both Transcriptomics and Bioinformatics involve analyzing biological data, Transcriptomics focuses on studying gene expression profiles using sequencing technologies, whereas Bioinformatics encompasses a broader range of computational methods to analyze various biological datasets. Professionals in both fields often collaborate but have distinct skill sets and work environments.

What cities near Boston, MA are hiring for Transcriptomics jobs? Cities near Boston, MA with the most Transcriptomics job openings:
Infographic showing various Transcriptomics job openings in Boston, MA as of August 2026, with employment types broken down into 100% Full Time. Highlights an 89% In-person, and 11% Hybrid job distribution, with an average salary of $221,048 per year, or $106.3 per hour.

Bioinformatics Leader

ZS

Boston, MA • On-site

$200K - $229K/yr

Full-time

Re-posted 28 days ago


Job description

ZS is a place where passion changes lives. As a management consulting and technology firm focused on improving life and how we live it, we transform ideas into impact by bringing together data, science, technology and human ingenuity to deliver better outcomes for all. Here you'll work side-by-side with a powerful collective of thinkers and experts shaping life-changing solutions for patients, caregivers and consumers, worldwide. ZSers drive impact by bringing a client-first mentality to each and every engagement. We partner collaboratively with our clients to develop custom solutions and technology products that create value and deliver company results across critical areas of their business. Bring your curiosity for learning, bold ideas, courage and passion to drive life-changing impact to ZS.
#LI-AS4
ZS Discovery partners with pharmaceutical and biotech clients to accelerate the discovery of safer, more effective therapeutics. The team brings hands-on scientific expertise, advanced analytics, AI, and strategic consulting to help research organizations become more productive, more data-driven, and more confident in their decisions. As a venture within ZS building toward practice status, Discovery combines agility and innovation with the resources and knowledge of the broader firm.
Bioinformatics Leader
ZSD's bioinformatics team delivers work spanning multi-omics analysis, computational biology, GxP pipeline development, and platform architecture for some of the world's largest pharma and biotech companies. This role sits at the senior end of the delivery team: leading engagements, building client relationships, and contributing to business development. You will work as a trusted advisor to R&D leaders, helping them think through how bioinformatics can accelerate their programs.
What you'll do:
  • Lead bioinformatics strategy and execution across assigned Discovery client engagements, serving as the primary scientific and analytical point of contact
  • Contribute to business development efforts by shaping proposals, identifying expansion opportunities within existing accounts, and supporting client conversations
  • Design and implement computational workflows for analysis of multi-omic data (genomics, transcriptomics, proteomics) in drug discovery and translational contexts
  • Translate complex biological questions into analytical frameworks, delivering clear, client-ready insights to research and R&D stakeholders
  • Collaborate with cross-functional teams, including scientific strategy, AI, data, and technology, to deliver integrated solutions across the Discovery portfolio
  • Mentor and guide junior bioinformatics staff, supporting their technical development and project contributions
  • Stay current on emerging tools, platforms, and methods in bioinformatics and apply relevant advances to client work
  • Support the development of ZSD's bioinformatics capabilities, including internal tools, methodologies, and thought leadership

What you'll bring:
  • Advanced degree (PhD or Master's) in bioinformatics, computational biology, genomics, or a closely related field, or equivalent applied experience
  • Deep, hands-on proficiency in bioinformatics tools and programming languages (e.g., Python, R, Nextflow, Snakemake) and experience with cloud-based compute environments
  • Domain expertise in at least one biological modality-such as genomics, transcriptomics, or single-cell-with AI and ML applied as tools within a broader scientific context
  • Experience working with human patient-level data and multimodal datasets (omics, imaging, clinical/RWE) in a translational or drug discovery setting
  • Strong communication skills with the ability to present complex analytical findings to both scientific and non-scientific audiences
  • Experience in a consulting firm, CRO, biotech, or pharma R&D environment preferred; client-facing or professional services experience is a plus
  • Collaborative spirit and the ability to work across teams with diverse scientific and functional backgrounds
  • Fluency in English
  • Client-first mentality
  • Intense work ethic
  • Collaborative spirit and problem-solving approach

How you'll grow:
  • Cross-functional skills development & custom learning pathways
  • Milestone training programs aligned to career progression opportunities
  • Internal mobility paths that empower growth via s-curves, individual contribution and role expansions

Perks & Benefits:
At ZS, your growth matters. We offer a comprehensive total rewards package that supports your health and well-being, financial future, time away, and professional development. With robust skills-building programs, multiple career progression paths, internal mobility, and a deeply collaborative culture, you'll have the opportunity to do meaningful work, expand your capabilities, and thrive as part of a global community. For details on total rewards in United States, visit ZS US office locations | Where we work | ZS.
Hybrid working model:
We are committed to giving our employees a flexible and connected way of working. A flexible and connected ZS allows us to combine work from home and on-site presence at clients/ZS offices for the majority of our week. The magic of ZS culture and innovation thrives in both planned and spontaneous face-to-face connections.
Travel:
Travel is a requirement at ZS for client facing ZSers; business needs of your project and client are the priority. While some projects may be local, all client-facing ZSers should be prepared to travel as needed. Travel provides opportunities to strengthen client relationships, gain diverse experiences, and enhance professional growth by working in different environments and cultures.
Considering applying?
At ZS, we honor the visible and invisible elements of our identities, personal experiences, and belief systems-the ones that comprise us as individuals, shape who we are, and make us unique. We believe your personal interests, identities, and desire to learn are integral to your success here. We are committed to building a team that reflects a broad variety of backgrounds, perspectives, and experiences. Learn more about our inclusion and belonging efforts and the networks ZS supports to assist our ZSers in cultivating community spaces and obtaining the resources they need to thrive.
If you're eager to grow, contribute, and bring your unique self to our work, we encourage you to apply.
ZS is an equal opportunity employer and is committed to providing equal employment and advancement opportunities without regard to any class protected by applicable law.
Work Authorization:
This position is not eligible for visa sponsorship. Candidates must have authorization to work in the United States that does not now or in the future require employer sponsorship.
To complete your application:
An on-line application, including a full set of transcripts (official or unofficial), is required to be considered.
NO AGENCY CALLS, PLEASE.
Find Out More At:
www.zs.com

ZS logo

About ZS

Sourced by ZipRecruiter

Industry

Business management consulting

Company size

10,000+ Employees

Headquarters location

Evanston, IL, US

Year founded

1983