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Spatial Transcriptomics Jobs in San Jose, CA (NOW HIRING)

Technical Recruiter

San Francisco, CA · On-site

$140K - $180K/yr

You'll recruit across the assay platforms we benchmark-spatial transcriptomics, scRNA-seq, proteomics, genomics, biosurveillance, omics, and emerging fields-sourcing computational and wet lab experts ...

CLIA Lab Director

San Francisco, CA · On-site

$200K - $300K/yr

... transcriptomics) and analytical approaches into clinical care for the very first time. We've just ... spatial RNA sequencing * Manage technical transfer of assays from R&D into clinical operations

Showing results 41-59

Spatial Transcriptomics information

See San Jose, CA salary details

$57.4K

$238.5K

$468.8K

How much do spatial transcriptomics jobs pay per year?

As of Aug 7, 2026, the average yearly pay for spatial transcriptomics in San Jose, CA is $238,462.00, according to ZipRecruiter salary data. Most workers in this role earn between $92,000.00 and $468,800.00 per year, depending on experience, location, and employer.

What is spatial transcriptomics?

Spatial transcriptomics is an advanced technique that allows scientists to measure gene expression within the spatial context of tissue samples. Unlike traditional RNA sequencing, which loses information about where each gene is expressed, spatial transcriptomics preserves the physical location of gene activity in tissues. This helps researchers better understand how cells function within their native environments and interact with neighboring cells, which is especially valuable in fields like cancer research, neuroscience, and developmental biology. The method combines microscopy, molecular biology, and computational analysis to produce detailed maps of gene expression.

What are some common challenges faced by professionals working in spatial transcriptomics, and how can they be addressed?

Professionals in spatial transcriptomics often encounter challenges related to handling large, complex datasets and integrating spatial information with gene expression data. Ensuring high-quality sample preparation and mastering advanced imaging or sequencing technologies are also frequent hurdles. These challenges can be addressed by collaborating closely with multidisciplinary teams—including bioinformaticians, molecular biologists, and imaging specialists—and staying up-to-date with the latest software tools and protocols. Continuous learning and effective communication within the team are key to overcoming technical and analytical obstacles in this rapidly evolving field.

What are the key skills and qualifications needed to thrive as a spatial transcriptomics scientist?

To thrive as a Spatial Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree in a life science field. Familiarity with spatial transcriptomics platforms (such as 10x Genomics Visium), next-generation sequencing (NGS) technologies, and data analysis tools like R or Python is essential. Strong problem-solving skills, attention to detail, and effective communication are important soft skills for collaborating on interdisciplinary research projects. These skills and qualities are crucial for generating high-quality spatial gene expression data and translating findings into meaningful biological insights.
What are popular job titles related to Spatial Transcriptomics jobs in San Jose, CA? For Spatial Transcriptomics jobs in San Jose, CA, the most frequently searched job titles are:
What job categories do people searching Spatial Transcriptomics jobs in San Jose, CA look for? The top searched job categories for Spatial Transcriptomics jobs in San Jose, CA are:
What cities near San Jose, CA are hiring for Spatial Transcriptomics jobs? Cities near San Jose, CA with the most Spatial Transcriptomics job openings:
Infographic showing various Spatial Transcriptomics job openings in San Jose, CA as of August 2026, with employment types broken down into 72% Full Time, 24% Part Time, 1% Temporary, and 3% Contract. Highlights an 72% Physical, 2% Hybrid, and 26% Remote job distribution, with an average salary of $238,462 per year, or $114.6 per hour.

Junior or Assistant Specialist- Cho/Cheng Lab

University of California, San Francisco

San Francisco, CA • On-site

Full-time

Re-posted 11 days ago


University Of California San Francisco rating

7.8

Company rating: 7.8 out of 10

Based on 13 frontline employees who took The Breakroom Quiz

228th of 616 rated colleges and universities


Job description

Application Window
Open date: February 27, 2026
Most recent review date: Friday, Jul 31, 2026 at 11:59pm (Pacific Time) Applications received after this date will be reviewed by the search committee if the position has not yet been filled.
Final date: Friday, Aug 27, 2027 at 11:59pm (Pacific Time) Applications will continue to be accepted until this date, but those received after the review date will only be considered if the position has not yet been filled.
Position description
Junior or Assistant Specialist- Cho/Cheng Lab
University of California, San Francisco
Department of Dermatology
The Raymond Cho/Jeffrey Cheng UCSF Dermatology lab is actively seeking a highly motivated research specialist at the junior or assistant level. Our laboratory focuses on developing precision medicine approaches to improve treatment of inflammatory skin disease. We study human and mouse model inflammatory skin diseases on the single-cell level (single cell RNA-sequencing, spatial transcriptomics, and highly multiplexed immunofluorescence) to further molecular classification and treatment response prediction.
We expect the appointee to participate in and receive authorship in scientific articles and to contribute to the intellectual environment of the laboratory, in addition to supporting and managing the lab. He/she must be able to plan, conduct, and oversee experiments, independently develop and optimize experimental protocols, and interpret data and results.
Required Qualifications:
• Specialists appointed at the junior rank must possess a baccalaureate degree (or equivalent degree) or at least four years of research experience.
• Specialists appointed at the Assistant rank must possess a master's degree or a baccalaureate degree with three or more years of research experience
• 1.5 year commitment to working in the lab.
• Excellent organizational and written/oral communication skills
• Strong analytical and problem-solving abilities
• Attention to detail and accurate record keeping
• Ability to work well independently and collaboratively with other lab members
• Previous research experience of at least 6 months
• Candidates are required to meet the required qualifications at the time of hire.
• Candidate's CV and/or cover letter must state qualifications (or if pending) upon submission.
Preferred Qualifications:
• Expertise in immunology assays (such as flow cytometry, stimulation assays, ELISA)
• Experience with computer programming/bioinformatics
Please apply online , with a CV and cover letter. Screening of applicants will begin immediately and will continue as needed throughout the recruitment period. Salary and rank will be commensurate with the applicants experience and training.
See Table 24B for the salary range for this position. A reasonable estimate for this position is $55,000 - $70,700.
Application Requirements
Document requirements
  • Curriculum Vitae - CV must clearly list current and/or pending qualifications (e.g. board eligibility/certification, medical licensure, etc.).
  • Cover Letter

About UC San Francisco
As a University employee, you will be required to comply with all applicable University policies and/or collective bargaining agreements, as may be amended from time to time. Federal, state, or local government directives may impose additional requirements.
The University of California is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, age, protected veteran status, or other protected status under state or federal law.
UCSF is committed to welcoming and serving all people, honoring the dignity of every individual without preference or prejudice, in support of its public mission and in alignment with our PRIDE values and Principles of Community.
As a condition of employment, the finalist will be required to disclose if they are subject to any final administrative or judicial decisions within the last seven years determining that they committed any misconduct.
• "Misconduct" means any violation of the policies or laws governing conduct at the applicant's previous place of employment, including, but not limited to, violations of policies or laws prohibiting sexual harassment, sexual assault, or other forms of harassment, or discrimination, as defined by the employer.
• UC Sexual Violence and Sexual Harassment Policy
• UC Anti-Discrimination Policy
• APM - 035: Affirmative Action and Nondiscrimination in Employment
Job location
San Francisco, CA

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