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Spatial Transcriptomics Jobs in Baltimore, MD (NOW HIRING)

Spatial Transcriptomics information

See Baltimore, MD salary details

$48.7K

$202.2K

$397.5K

How much do spatial transcriptomics jobs pay per year?

As of Jun 5, 2026, the average yearly pay for spatial transcriptomics in Baltimore, MD is $202,173.00, according to ZipRecruiter salary data. Most workers in this role earn between $78,000.00 and $397,500.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Spatial Transcriptomics Scientist, and why are they important?

To thrive as a Spatial Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree in a life science field. Familiarity with spatial transcriptomics platforms (such as 10x Genomics Visium), next-generation sequencing (NGS) technologies, and data analysis tools like R or Python is essential. Strong problem-solving skills, attention to detail, and effective communication are important soft skills for collaborating on interdisciplinary research projects. These skills and qualities are crucial for generating high-quality spatial gene expression data and translating findings into meaningful biological insights.

What are some common challenges faced by professionals working in spatial transcriptomics, and how can they be addressed?

Professionals in spatial transcriptomics often encounter challenges related to handling large, complex datasets and integrating spatial information with gene expression data. Ensuring high-quality sample preparation and mastering advanced imaging or sequencing technologies are also frequent hurdles. These challenges can be addressed by collaborating closely with multidisciplinary teams—including bioinformaticians, molecular biologists, and imaging specialists—and staying up-to-date with the latest software tools and protocols. Continuous learning and effective communication within the team are key to overcoming technical and analytical obstacles in this rapidly evolving field.

What is spatial transcriptomics?

Spatial transcriptomics is an advanced technique that allows scientists to measure gene expression within the spatial context of tissue samples. Unlike traditional RNA sequencing, which loses information about where each gene is expressed, spatial transcriptomics preserves the physical location of gene activity in tissues. This helps researchers better understand how cells function within their native environments and interact with neighboring cells, which is especially valuable in fields like cancer research, neuroscience, and developmental biology. The method combines microscopy, molecular biology, and computational analysis to produce detailed maps of gene expression.
What are popular job titles related to Spatial Transcriptomics jobs in Baltimore, MD? For Spatial Transcriptomics jobs in Baltimore, MD, the most frequently searched job titles are:
What cities near Baltimore, MD are hiring for Spatial Transcriptomics jobs? Cities near Baltimore, MD with the most Spatial Transcriptomics job openings:
Assistant or Associate Professor in Genomics and Bioinformatics

Assistant or Associate Professor in Genomics and Bioinformatics

University of Maryland, Baltimore

Baltimore, MD • On-site

$129K - $174K/yr

Full-time

Medical, PTO

Posted 4 days ago


University Of Maryland, Baltimore rating

7.7

Company rating: 7.7 out of 10

Based on 13 frontline employees who took The Breakroom Quiz

213th of 532 rated colleges and universities


Job description

Position Description The Institute for Genome Sciences (IGS), University of Maryland School of Medicine (UMSOM) invites applications for a tenure-track faculty position at the rank ofAssistant Professoror*Associate Professor.** *Applicants are expected to participate in a transdisciplinary research program and should possess demonstrated expertise in developing and applying multi-omics approaches for basic and translational biomedical research. We especially encourage applicants with research programs focused on developing machine learning / AI methods for bioinformatics, subclone and mutational analysis, genome structure, epigenetics, antigen prediction, immune repertoire sequencing, or other related areas. Qualifications The successful candidate will hold a Ph.D., M.D., or M.D./Ph.D.

in genomics, computational biology, bioinformatics, biostatistics, bioengineering, computer science, mathematical biology, or a related discipline, with a strong background in analyzing and integrating tumor biology and clinical data streams. Biologists and clinical investigators with strong backgrounds in applying computational methods to these problems will also be considered. Candidates should demonstrate the potential to establish a funded research program and have a strong track record of collaborations with clinical and basic scientists.

The successful candidate will be expected to engage in mentoring and teaching and contribute to the service missions of IGS as well as the broader UMSOM. We welcome applicants with research experience in academia, industry, or government who can bring all perspectives and expertise to our team. About the Institute for Genome Sciences IGS (www.igs.umaryland.edu) is a transdisciplinary research institute committed to high-impact science that advances global human health.

With a collaborative faculty of over 30 investigators, IGS fosters a highly integrative research environment with expertise spanning the quantitative and data sciences, systems biology, human genomics, and microbial genomics. Faculty at IGS have access to state-of-the-art genomics resources, including PacBio, Illumina, and Oxford Nanopore sequencing platforms, as well as single-cell and spatial transcriptomics through Maryland Genomics, our high-throughput core laboratory. Faculty also benefit from advanced computational infrastructure for high-throughput genomics datasets and data infrastructure supporting numerous genomics consortia.

The candidate will be encouraged to build a research program collaborating with other departments and clinical programs at the University of Maryland School of Medicine, enhancing opportunities for cross-disciplinary clinical research with the University of Maryland Medical Center. Expected rank for this position will be Assistant Professor or higher, however, final rank and tenure status will be commensurate with selected candidate's experience. The salary range for this position is $129,058 to $174,709 which represents the minimum and maximum salaries for this position and is based on the University of Maryland School of Medicine's good faith belief at the time of posting.

Not all candidates will be eligible for the upper end of the salary range. The actual compensation offered to the selected candidate may vary and will ultimately depend on multiple factors, which may include the successful candidate's geographic location, skills, work experience, internal equity, market conditions, education/training and other factors, as reasonably determined by the University. UMB offers a comprehensive benefits package that prioritizes wellness, work/life balance, and professional development.

This position participates in a retirement program that must be selected and is effective on your date of hire. Faculty receive a generous leave package that includes over 4 weeks of vacation accrued each year, paid holidays, personal leave, unlimited accrual of sick time, and comprehensive health insurance; professional learning and development programs; tuition remission for employees and their dependents at any University System of Maryland school. UMB is an equal opportunity employer.

All qualified applicants will receive consideration for employment without regard to sex, gender identity, sexual orientation, race, color, religion, national origin, disability, protected Veteran status, age, or any other characteristic protected by law or policy. If you need a reasonable accommodation for a disability for any part of the employment process, please submit an onlinerequestor contactHRDiversity@umaryland.edu. Please note that only inquiries concerning a request for reasonable accommodation will be responded to from this email address.

We value diversity and how it enriches our academic and scientific community and strive toward cultivating an inclusive environment that supports all employees. To Apply: Submit a cover letter, curriculum vitae, a description of your research program, and contact information for three references toIGSDirector@som.umaryland.edu. Review of applications will begin immediately and continue until position is filled.

Job: *Faculty Organization: *School of Medicine - Centers/Programs/ORCs Title: Assistant or Associate Professor in Genomics and Bioinformatics Location: null Requisition ID: 2500016S


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