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Spatial Transcriptomics Jobs in Michigan (NOW HIRING)

Spatial Transcriptomics information

What is spatial transcriptomics?

Spatial transcriptomics is an advanced technique that allows scientists to measure gene expression within the spatial context of tissue samples. Unlike traditional RNA sequencing, which loses information about where each gene is expressed, spatial transcriptomics preserves the physical location of gene activity in tissues. This helps researchers better understand how cells function within their native environments and interact with neighboring cells, which is especially valuable in fields like cancer research, neuroscience, and developmental biology. The method combines microscopy, molecular biology, and computational analysis to produce detailed maps of gene expression.

What are the key skills and qualifications needed to thrive as a spatial transcriptomics scientist?

To thrive as a Spatial Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree in a life science field. Familiarity with spatial transcriptomics platforms (such as 10x Genomics Visium), next-generation sequencing (NGS) technologies, and data analysis tools like R or Python is essential. Strong problem-solving skills, attention to detail, and effective communication are important soft skills for collaborating on interdisciplinary research projects. These skills and qualities are crucial for generating high-quality spatial gene expression data and translating findings into meaningful biological insights.

What are some common challenges faced by professionals working in spatial transcriptomics, and how can they be addressed?

Professionals in spatial transcriptomics often encounter challenges related to handling large, complex datasets and integrating spatial information with gene expression data. Ensuring high-quality sample preparation and mastering advanced imaging or sequencing technologies are also frequent hurdles. These challenges can be addressed by collaborating closely with multidisciplinary teams—including bioinformaticians, molecular biologists, and imaging specialists—and staying up-to-date with the latest software tools and protocols. Continuous learning and effective communication within the team are key to overcoming technical and analytical obstacles in this rapidly evolving field.
Infographic showing various Spatial Transcriptomics job openings in Michigan as of August 2026, with employment types broken down into 100% Full Time. Highlights an 92% In-person, and 8% Remote job distribution.

Research Lab Specialist Inter

Ann Arbor, MI • On-site

University of Michigan Flint
Colleges, Universities, and Professional Schools • 10K+ employees

Other

Medical, Dental, Vision, Retirement

Re-posted 2 days ago


University Of Michigan rating

8.0

Company rating: 8.0 out of 10

Based on 147 frontline employees who took The Breakroom Quiz


Job description

Job Summary

Join the expanding Michigan Center for Translational Pathology laboratory to work in the research sequencing team. Our laboratory uses high-throughput technologies to understand the mechanisms of cancer progression and to develop new prognostic/diagnostic biomarkers of cancer. The laboratory provides enormous resources and opportunities for an individual to learn traditional cellular/molecular techniques as well as state-of-the-art technologies, including Next Generation Sequencing, single cell sequencing, and spatial transcriptomics.

Responsibilities*
  • Isolate RNA and DNA from tissues and blood and prepare samples through PCR and gel electrophoresis for sequencing.
  • Check sample quality via spectrophotometer, bioanalyzer, and qPCR.
  • Prepare NGS libraries for all the labs in MCTP as well as other collaborators, helping the research sequencing group manage the increasing volume of libraries (RNA-Seq, ChIP-Seq, Capture-Seq and etc.).
  • Support library prep for single-cell and spatial transcriptomics libraries, including work on Xenium, CytoAssist, and advanced sequencing platforms.
  • Run next-generation sequencing platforms, including Xenium, and support related library preparation workflows.
  • Validate potential candidate genes by Sanger sequencing and qPCR.
  • Write internal research reports summarizing research activities.
  • Participate in group meetings and interact as a team member with laboratory personnel.
  • Maintain and update all documentation for lab annual inspections, including writing SOPs, performing scheduled maintenance, and running various assays.
  • Run instrument validations and verifications for new and existing platforms. Testing and optimizing new technologies and new protocols.
  • The candidate should be very familiar and experienced with basic molecular biology and cell biology techniques and should have strong organizational skills to complete work in a timely manner.
Required Qualifications*
  • Master's degree in biology or a related field.
  • Minimum of five years' experience in basic laboratory research.
  • Experience in a molecular biology and/or biochemistry research laboratory.
  • Familiarity with qPCR techniques, molecular cloning, and cell culture.
  • Experience with NGS library preparation (RNA-Seq, ChIP-Seq, Capture-Seq, etc.).
  • Strong foundation in basic molecular and cell biology techniques.
  • Willingness to learn new concepts and technologies, including single-cell and spatial transcriptomics platforms. Experience in assay development and validation.
  • Demonstrated ability to work collaboratively across multiple concurrent projects and with a range of collaborators.
  • Excellent organizational skills, attention to detail, and record-keeping, with the ability to complete work in a timely manner.
Desired Qualifications*
  • PhD in biological science or a related field.
  • Prior hands-on experience with single-cell or spatial transcriptomics platforms.
Why Join Michigan Medicine?

Michigan Medicine is one of the largest health care complexes in the world and has been the site of many groundbreaking medical and technological advancements since the opening of the U-M Medical School in 1850. Michigan Medicine is comprised of over 30,000 employees and our vision is to attract, inspire, and develop outstanding people in medicine, sciences, and healthcare to become one of the world's most distinguished academic health systems. In some way, great or small, every person here helps to advance this world-class institution. Work at Michigan Medicine and become a victor for the greater good.

What Benefits can you Look Forward to?

  • Excellent medical, dental and vision coverage effective on your very first day
  • 2:1 Match on retirement savings

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About University of Michigan

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The University of Michigan (U-M), based in Ann Arbor, MI, US, is one of America's most esteemed institutions in higher education. Established in 1817, it presides in the industry of education and research, providing a range of services including undergraduate, graduate, and professional education programs. Complementing this is an extensive research activity that has significantly contributed to various fields, from healthcare to engineering, humanities to sports. Upholding its mission "to serve the people of Michigan and the world through preeminence in creating, communicating, preserving and applying knowledge, art, and academic values", U-M consistently ranks among the top universities globally, a testament to its tradition of excellence in learning and research, and a deep commitment to innovation and discovery.

Industry

Colleges, universities, and professional schools

Company size

10,000+ Employees

Headquarters location

Ann Arbor, MI, US

Year founded

1817

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