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Single Cell Spatial Transcriptomics Jobs in Hartford, CT

Single Cell Spatial Transcriptomics information

See Hartford, CT salary details

$12

$21

$30

How much do single cell spatial transcriptomics jobs pay per hour?

As of Aug 25, 2026, the average hourly pay for single cell spatial transcriptomics in Hartford, CT is $21.83, according to ZipRecruiter salary data. Most workers in this role earn between $16.97 and $27.40 per hour, depending on experience, location, and employer.

What is single cell spatial transcriptomics?

Single cell spatial transcriptomics is a cutting-edge technique that allows researchers to analyze gene expression in individual cells while preserving their spatial location within a tissue. This method combines the high-resolution insights of single-cell RNA sequencing with spatial information, enabling scientists to understand how cells interact and organize within their native environments. It is widely used in biomedical research to study tissue architecture, disease mechanisms, and cellular heterogeneity.

What are the typical challenges faced by professionals working in single cell spatial transcriptomics, and how can they be addressed?

Professionals in Single Cell Spatial Transcriptomics often encounter challenges related to handling large, complex data sets and integrating spatial information with single-cell transcriptomic profiles. These tasks demand strong computational skills and close collaboration with bioinformaticians and other researchers. Effective communication within interdisciplinary teams is essential to ensure experimental design aligns with downstream analysis needs. Staying updated with rapidly evolving technologies and best practices also helps professionals overcome technical hurdles and produce reliable, high-impact results.

What are the key skills and qualifications needed to thrive as a single cell spatial transcriptomics scientist, and why are they important?

To thrive as a Single Cell Spatial Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree (PhD or MSc) in a relevant field. Familiarity with high-throughput sequencing platforms, spatial transcriptomics technologies (like 10x Genomics Visium or NanoString GeoMx), and data analysis tools such as R or Python is essential. Critical thinking, problem-solving, and effective communication are crucial soft skills for interpreting complex data and collaborating in multidisciplinary teams. These skills and qualities are vital for generating reliable insights into cellular function and spatial organization, which drive innovative research and discovery.

What are popular job titles related to Single Cell Spatial Transcriptomics jobs in Hartford, CT?

For Single Cell Spatial Transcriptomics jobs in Hartford, CT, the most frequently searched job titles are:

What job categories do people searching Single Cell Spatial Transcriptomics jobs in Hartford, CT look for?

The top searched job categories for Single Cell Spatial Transcriptomics jobs in Hartford, CT are:

Infographic showing various Single Cell Spatial Transcriptomics job openings in Hartford, CT as of August 2026, with employment types broken down into 1% Locum Tenens, 1% As Needed, 76% Full Time, 17% Part Time, and 5% Contract. Highlights an 92% Physical, 2% Hybrid, and 6% Remote job distribution, with an average salary of $45,414 per year, or $21.8 per hour.

Postdoctoral Associate | JAX/Connecticut Children's Medical Hospital

The Jackson Laboratory

Farmington, CT • On-site

$75K/yr

Full-time

Re-posted 17 days ago


The Jackson Laboratory rating

8.6

Company rating: 8.6 out of 10

Based on 24 frontline employees who took The Breakroom Quiz

20th of 120 rated laboratories


Job description

Postdoctoral Fellow | JAX/Connecticut Children's

Jalili Lab, Farmington, CT

Division of Digestive Diseases, Hepatology, and Nutrition, Connecticut Children's

The Jalili Lab/Connecticut Children's GI collaboration is seeking a highly motivated and talented postdoctoral fellow to join our team. The successful candidate will have the opportunity to work on cutting-edge research projects related to establishing an in vitro gastrointestinal host immune-microbiome culture model for disease modeling and therapeutic development. The project involves multiple technologies, including organoid engineering, organ-on-a-chip platforms, microfluidics, and microbiome science, for modeling intestinal inflammatory conditions, such as Crohn's disease, ulcerative colitis, celiac disease, and eosinophilic esophagitis. We will use mouse- and patient-derived cells/organoids and microbiomes, in concert with our complex Organ Chip models, to study the underlying mechanisms of these diseases and the role of immune cells in regulating and responding to intestinal microbiota. The postdoctoral scientist will help lead an exciting project that applies to a broad range of cutting-edge technologies, such as Organ-on-a-Chip development, organoid culture, microbiome sequencing, single-cell transcriptomics, metagenomics and proteomics. This position also leverages collaboration between clinicians and investigators at the Jackson Laboratory, Connecticut Children's, and UConn Health. The ideal candidate should have a strong background in biomedical engineering, organoid culture, and immunology. Prior research experience in gastroenterology is preferred.

JAXhas a vibrant and interactive research and training environment characterized by multidisciplinary scientific collaboration, unparalleled mouse resources, and outstanding core services. In addition to lab-based training, JAX has developed a unique program for trainees to expand their professional skills in science communication, entrepreneurship, teaching, mentoring and laboratory management to best prepare postdocs for future career opportunities. In Connecticut, JAX resides in the scenic town of Farmington, in the state's capitol region. The Hartford region, which offers some of the best public schools in the country, is made up of both bigger cities and smaller, charming historic New England towns. JAX Genomic Medicine is also geographically located within 1.5-2 hours of Boston and New York and is close to multiple transportation systems, including bus lines, highways, railroads and international airports.

The clinical component collaborating on these projects is the Division of Digestive Diseases, Hepatology, and Nutrition at Connecticut Children's. The Division currently has 15 physicians, 3 research coordinators, and 6 dieticians. It sees over 15,000 patient visits per year and currently cares for 900 patients with Crohn's disease or ulcerative colitis, 500 with celiac disease, and 500 with eosinophilic esophagitis. The Division is led by Dr. Jeffrey Hyams the current co-PI of the $14M NIH-supported CAMEO study: Clinical, imaging, and endoscopic outcomes of children newly diagnosed with Crohn's disease.

Qualifications

  • Ph.D. in biomedical sciences, bioengineering, microbiology, immunology or related field of study.
  • Strong skillsets in cell and tissue engineering
  • Strong training background in bioengineering, immunoengineering and cell biology.
  • Experience in in vivo models, gastroenterology research, bacterial cultures, host-microbiome interactions, and multi-omics approaches are particularly preferred.
  • Candidates should have at least one 1st author publication record in peer-reviewed journal.
  • Excellent writing and communication skills, able to work independently and effectively with other members in a productive team.

To apply

Interested candidates must submit all three application components listed below. Incomplete applications will not be considered.

  • A cover letter summarizing research training and accomplishments
  • A personal statement of scientific interests and career goals (1-page maximum)
  • Current CV with publications and contact information of three references

The Jalili lab supports postdocs that have either academic or non-academic long-term career goals, international candidates, women and candidates from all backgrounds. We truly believe in equal opportunity for all. For more information about the Jalili laboratory, please visit: https://www.jalili-lab.com.

JAX Salary

Year 0 - 1: $65,589

Year 1 - 2: $67,318

Year 2 - 3: $69,095

Year 3 - 4: $70,521

Year 4 - 5: $72,877

Year 5 - 6: $75,569

Based on years of experience as Postdoc

About JAX:

The Jackson Laboratory is an independent, nonprofit biomedical research institution with a National Cancer Institute-designated Cancer Center and nearly 3,000 employees in locations across the United States (Maine, Connecticut, California),Japan andChina. Its mission is to discover precise genomic solutions for disease and empower the global biomedical community in the shared quest to improve human health.

Founded in 1929, JAX applies over nine decades of expertise in genetics to increase understanding of human disease, advancing treatments and cures for cancer, neurological and immune disorders, diabetes, aging and heart disease. It models and interprets genomic complexity, integrates basic research with clinical application, educates current and future scientists, and provides critical data, tools and services to the global biomedical community. For more information, please visitwww.jax.org.

EEO Statement:

The Jackson Laboratory provides equal employment opportunities to all employees and applicants for employment in all job classifications without regard to race, color, religion, age, mental disability, physical disability, medical condition, gender, sexual orientation, genetic information, ancestry, marital status, national origin, veteran status, and other classifications protected by applicable state and local non-discrimination laws.


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