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Remote Bioinformatics Python Jobs in San Jose, CA

Natera

Senior Bioinformatics Scientist

San Francisco, CA · On-site +1

$117K - $146K/yr

Strong Python programming skills, including fluency with the scientific computing stack (NumPy ... Remote USA $117,400--$146,800 USD OUR OPPORTUNITY Natera™ is a global leader in cell-free DNA ...

Freenome

Senior Machine Learning Scientist

Brisbane, CA · On-site +1

$110K - $150K/yr

... remote. What you'll do: * Independently pursue cutting edge research in AI applied to biological ... Python, R, Java, C, C++, etc. * Proficiency in one or more ML frameworks such as; Pytorch ...

Freenome

Staff Machine Learning Scientist

Brisbane, CA · On-site

$199K - $283K/yr

... remote. What you'll do: * Independently pursue cutting edge research in AI applied to biological ... Python, R, Java, C, C++, etc. * Proficiency in one or more ML frameworks such as; Pytorch ...

Freenome

Senior Machine Learning Scientist

Brisbane, CA · On-site

$110K - $150K/yr

... remote. What you'll do: * Independently pursue cutting edge research in AI applied to biological ... Python, R, Java, C, C++, etc. * Proficiency in one or more ML frameworks such as; Pytorch ...

Freenome

Staff Machine Learning Scientist

Brisbane, CA · On-site +1

$199K - $283K/yr

... remote. What you'll do: * Independently pursue cutting edge research in AI applied to biological ... Python, R, Java, C, C++, etc. * Proficiency in one or more ML frameworks such as; Pytorch ...

NextSense

Senior ML/Research Scientist

Mountain View, CA · On-site +1

$116K - $148K/yr

Strong Python programming skills; ability to demonstrate mastery through work experience or ... Mountain View, CA (not a remote position) Employment Eligibility: At this time NextSense is only ...

Freenome

Senior Software Engineer II

Brisbane, CA · On-site

$161K - $227K/yr

This role will be a Remote role. What you'll do: * Design, develop, and deploy reliable ... Proficiency in Python and experience with backend development in a team production environment.

Freenome

Senior Software Engineer II

Brisbane, CA · Remote

$161K - $227K/yr

This role will be a Remote role. What you'll do: * Design, develop, and deploy reliable ... Proficiency in Python and experience with backend development in a team production environment.

Natera

Principal Software Engineer

South San Francisco, CA · On-site

$162K - $217K/yr

Remote optional Job Type: Full-time About the Role We're seeking a Principal Software Engineer to ... Strong proficiency in at least one general-purpose language (Python, Go, Java, or similar)

Natera

Principal Software Engineer

South San Francisco, CA · Remote

$162K - $217K/yr

Remote optional Job Type: Full-time About the Role We're seeking a Principal Software Engineer to ... Strong proficiency in at least one general-purpose language (Python, Go, Java, or similar)

Natera

Principal Software Engineer

San Francisco, CA · Remote

$159K - $213K/yr

Remote optional Job Type: Full-time About the Role We're seeking a Principal Software Engineer to ... Strong proficiency in at least one general-purpose language (Python, Go, Java, or similar)

All JobsRemote Bioinformatics Python JobsRemote Bioinformatics Python Jobs in San Jose, CA

Remote Bioinformatics Python information

See San Jose, CA salary details

$15

$68

$101

How much do remote bioinformatics python jobs pay per hour?

As of Jun 25, 2026, the average hourly pay for remote bioinformatics python in San Jose, CA is $68.70, according to ZipRecruiter salary data. Most workers in this role earn between $56.63 and $78.03 per hour, depending on experience, location, and employer.

What is the difference between Remote Bioinformatics Python vs Remote Genomic Data Analyst?

AspectRemote Bioinformatics PythonRemote Genomic Data Analyst
Required SkillsPython, bioinformatics tools, data analysisGenomic data interpretation, statistical analysis, Python (optional)
Work EnvironmentResearch labs, biotech companies, academiaHealthcare institutions, research organizations, biotech firms
Common CertificationsBioinformatics certifications, Python programmingBioinformatics or genomics certifications, data analysis skills

Remote Bioinformatics Python roles focus on developing and applying Python-based tools for biological data analysis, often requiring programming expertise. Remote Genomic Data Analysts interpret genomic datasets, utilizing statistical and bioinformatics skills. Both roles are prevalent in biotech and research industries, but Bioinformatics Python positions emphasize coding, while Genomic Data Analysts focus more on data interpretation and reporting.

What is a Remote Bioinformatics Python job?

A Remote Bioinformatics Python job involves using the Python programming language to analyze biological data, such as DNA, RNA, or protein sequences, from a remote location. Professionals in this role develop algorithms, scripts, and tools to process and interpret complex datasets, often supporting research in genomics, drug discovery, and healthcare. Working remotely allows bioinformaticians to collaborate with global teams and contribute to scientific projects without needing to relocate. These roles typically require strong programming skills, knowledge of bioinformatics concepts, and experience with biological databases.

What are the key skills and qualifications needed to thrive as a Remote Bioinformatics Python professional, and why are they important?

To thrive as a Remote Bioinformatics Python professional, you need a strong background in biology, statistics, and computational analysis, typically supported by a degree in bioinformatics, computational biology, or a related field. Expertise in Python programming, familiarity with bioinformatics tools (such as Biopython, pandas, and NumPy), and experience using platforms like Git and Linux are essential. Strong problem-solving, communication, and self-motivation skills help you collaborate effectively and manage projects independently in a remote environment. These skills ensure that you can analyze complex biological data accurately, share insights with interdisciplinary teams, and contribute effectively to research or clinical projects from a remote setting.

How do remote Bioinformatics Python professionals typically collaborate with research teams and handle data security?

Remote Bioinformatics Python professionals often work closely with interdisciplinary research teams, including biologists, statisticians, and software engineers. Collaboration is facilitated through regular video meetings, shared code repositories (like GitHub), and project management tools such as Jira or Trello. Data security is paramount in this field, so professionals must follow strict protocols for accessing and transferring sensitive biological data, often using encrypted channels and adhering to institutional or governmental compliance standards.
What are popular job titles related to Remote Bioinformatics Python jobs in San Jose, CA? For Remote Bioinformatics Python jobs in San Jose, CA, the most frequently searched job titles are:
What job categories do people searching Remote Bioinformatics Python jobs in San Jose, CA look for? The top searched job categories for Remote Bioinformatics Python jobs in San Jose, CA are:
What cities near San Jose, CA are hiring for Remote Bioinformatics Python jobs? Cities near San Jose, CA with the most Remote Bioinformatics Python job openings:
Remote Bioinformatics Python jobs near you

Senior Bioinformatics Scientist

Natera

San Francisco, CA • On-site, Remote

$117K - $146K/yr

Full-time

Medical, Dental, Vision, Life, Retirement

Posted 7 days ago

Natera rating

7.7

Company rating: 7.7 out of 10

Based on 35 frontline employees who took The Breakroom Quiz

49th of 103 rated laboratories

Job description

Natera is seeking a Senior Bioinformatics Scientist to lead the architecture, development, and automation of high-throughput genomic pipelines. This role is responsible for building production-grade software tools to analyze next-generation sequencing (NGS) data including variant calling, fusion detection, and data quality control. The ideal candidate combines a deep understanding of sequence alignment algorithms with strong object-oriented programming skills to design scalable computational workflows in a fast-paced, mission-driven environment.

Primary Responsibilities:

  • Analyze complex genomic datasets leveraging scaled in-house pipelines, partnering cross-functionally with wet-lab scientists and statisticians to rapidly deliver data-driven answers to critical research goals.
  • Architect, build, and deploy automated analysis pipelines for diagnostic tests, integrating robust capabilities for fusion detection, variant calling, and automated quality control metrics.
  • Engineer novel genomic analysis tools and proactively identify optimization pathways to enhance pipeline accuracy and efficiency.
  • Participate in code reviews, technical documentation, and the continuous improvement of core computational workflows.
  • Coordinate directly with downstream infrastructure teams to ensure R&D tools scale efficiently into production systems.

Qualifications:

  • Ph.D. or Master's degree with a minimum of 5 years of professional experience in Bioinformatics, Computer Science, Engineering, Biochemistry, or a related quantitative field.

Knowledge, Skills, and Abilities:

  • Deep theoretical and practical understanding of high-throughput DNA sequence data analysis, including mapping, sequence alignment, and variant calling workflows.
  • Advanced understanding of data structures, algorithm design, and computational complexity.
  • Strong Python programming skills, including fluency with the scientific computing stack (NumPy, Pandas, Scikit-learn) for data manipulation, analysis, and automation.
  • Proficiency with workflow languages — Nextflow or WDL strongly preferred — for developing, versioning, and deploying scalable bioinformatics pipelines.
  • Extensive experience in distributed computing and cloud environments; AWS strongly preferred, with hands-on use of cloud-native tools such as AWS Batch, S3, or Lambda.
  • Deep expertise navigating Linux environments, utilizing command-line tools, and writing efficient shell scripts.
  • Demonstrated technical autonomy and rigorous data discipline when troubleshooting high-complexity algorithmic challenges.
  • Excellent communication skills with a proven track record of explaining computational results clearly to cross-functional stakeholders.
  • Prior experience working with relational databases, particularly MySQL, is highly desirable.
The pay range is listed and actual compensation packages are based on a wide array of factors unique to each candidate, including but not limited to skill set, years & depth of experience, certifications and specific office location. This may differ in other locations due to cost of labor considerations.
Remote USA
$117,400—$146,800 USD

OUR OPPORTUNITY

Natera™ is a global leader in cell-free DNA (cfDNA) testing, dedicated to oncology, women's health, and organ health. Our aim is to make personalized genetic testing and diagnostics part of the standard of care to protect health and enable earlier and more targeted interventions that lead to longer, healthier lives.

The Natera team consists of highly dedicated statisticians, geneticists, doctors, laboratory scientists, business professionals, software engineers and many other professionals from world-class institutions, who care deeply for our work and each other. When you join Natera, you'll work hard and grow quickly. Working alongside the elite of the industry, you'll be stretched and challenged, and take pride in being part of a company that is changing the landscape of genetic disease management.

WHAT WE OFFER

Competitive Benefits - Employee benefits include comprehensive medical, dental, vision, life and disability plans for eligible employees and their dependents. Additionally, Natera employees and their immediate families receive free testing in addition to fertility care benefits. Other benefits include pregnancy and baby bonding leave, 401k benefits, commuter benefits and much more. We also offer a generous employee referral program!

For more information, visit www.natera.com.

Natera is proud to be an Equal Opportunity Employer. We are committed to ensuring a diverse and inclusive workplace environment, and welcome people of different backgrounds, experiences, abilities and perspectives. Inclusive collaboration benefits our employees, our community and our patients, and is critical to our mission of changing the management of disease worldwide.

All qualified applicants are encouraged to apply, and will be considered without regard to race, color, religion, gender, gender identity or expression, sexual orientation, national origin, genetics, age, veteran status, disability or any other legally protected status. We also consider qualified applicants regardless of criminal histories, consistent with applicable laws.

If you are based in California, we encourage you to read this important information for California residents.

Link: https://www.natera.com/notice-of-data-collection-california-residents/

Please be advised that Natera will reach out to candidates with a @natera.com email domain ONLY. Email communications from all other domain names are not from Natera or its employees and are fraudulent. Natera does not request interviews via text messages and does not ask for personal information until a candidate has engaged with the company and has spoken to a recruiter and the hiring team. Natera takes cyber crimes seriously, and will collaborate with law enforcement authorities to prosecute any related cyber crimes.

For more information:
- BBB announcement on job scams
- FBI Cyber Crime resource page

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