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Python Bioinformatics Jobs in Massachusetts (NOW HIRING)

Winaxis

Cloud Infrastructure/AI/ML Engineer

Boston, MA · On-site

$116K - $153K/yr

... bioinformatics pipeline management - Expertise in HPC (High Performance Computing), AWS, DNAnexus, AWS Sagemaker AI - Experience with cloud platforms: AWS, GCP - Proficiency in Python and Bash ...

Watershed Informatics

Software Engineer

Boston, MA

Experience in any of the following areas: sequencing data analysis, bioinformatics, data visualization, or statistics * Programming experience in Python, including experience with Pandas and ...

Foundation Medicine

Computational Biologist I

Boston, MA · Hybrid

$112K - $133K/yr

... bioinformatics, or a related field using NGS data * Proficiency in Unix or Unix-like operating systems; proficiency in one or more programming languages such as Python, R, SQL, or similar scientific ...

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Python Bioinformatics information

What is a Python Bioinformatics job?

A Python Bioinformatics job involves using Python programming to analyze and interpret biological data, such as DNA sequences, protein structures, and genomic information. Professionals in this role develop algorithms, write scripts, and use bioinformatics libraries like Biopython to process large datasets efficiently. They often work in research institutions, pharmaceutical companies, or healthcare organizations to support scientific discoveries and advancements in medicine. Strong skills in Python, data analysis, and computational biology are essential for success in this field.

What does a typical workday look like for a Python Bioinformatics professional?

A typical workday for a Python Bioinformatics professional often involves developing and maintaining data analysis pipelines, processing large biological datasets, and interpreting results in collaboration with biologists and other researchers. You'll spend substantial time writing scripts, troubleshooting code, and integrating different bioinformatics tools to address specific research questions. Team meetings and presentations are common, as the role requires frequent interaction with cross-functional colleagues. This dynamic environment offers the opportunity to stay engaged with new technologies and make meaningful contributions to scientific discovery.

What are the key skills and qualifications needed to thrive in the Python Bioinformatics position, and why are they important?

To thrive as a Python Bioinformatics professional, you need a strong foundation in biological sciences, proficiency in Python programming, and experience analyzing complex biological datasets. Familiarity with bioinformatics tools such as Biopython, BEDtools, and databases like NCBI, as well as knowledge of cloud computing platforms and relevant certifications, is commonly expected. Strong problem-solving abilities, attention to detail, and effective communication skills help you collaborate with interdisciplinary teams. These competencies are vital for interpreting biological data accurately, developing reliable pipelines, and advancing research objectives.

What are the most commonly searched types of Python Bioinformatics jobs in Massachusetts? The most popular types of Python Bioinformatics jobs in Massachusetts are:
What are popular job titles related to Python Bioinformatics jobs in Massachusetts? For Python Bioinformatics jobs in Massachusetts, the most frequently searched job titles are:
What job categories do people searching Python Bioinformatics jobs in Massachusetts look for? The top searched job categories for Python Bioinformatics jobs in Massachusetts are:
What cities in Massachusetts are hiring for Python Bioinformatics jobs? Cities in Massachusetts with the most Python Bioinformatics job openings:
Python Bioinformatics jobs near you
Infographic showing various Python Bioinformatics job openings in Massachusetts as of July 2026, with employment types broken down into 100% Full Time. Highlights an 68% In-person, and 32% Remote job distribution.
Computational Associate II - Gerstner Center for Cancer Diagnostics

Computational Associate II - Gerstner Center for Cancer Diagnostics

Broad Institute

Cambridge, MA • On-site

$58K - $80K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 25 days ago

Job description

General information
Location
Cambridge, MA
Ref #
44244
Job Family
Research
Workplace
On-Site
Date published
07/07/2026
Time Type
Full time
Pay Range
$58,000.00/yr - $80,667.00/yr
Description & Requirements
The Broad Institute of MIT and Harvard is seeking an outstanding candidate for a Computational Associate II position focused on developing novel liquid biopsy assays for cancer detection and monitoring based on circulating tumor DNA (ctDNA) within the Gerstner Center for Cancer Diagnostics and Broad Cancer Program. The Gerstner Center aims to develop blood biopsies, among other cancer diagnostics, that stand to benefit millions of patients worldwide.
The successful candidate will be principally responsible for implementing, optimizing, and applying bioinformatics workflows to advance new technology development and the application of novel diagnostic assays to impactful clinical studies.
The incumbent is expected to interface closely with a multidisciplinary team, performing analyses that directly inform (i) new experiments in the lab, (ii) new ways to apply our technologies, and (iii) new insights as to the predictive and prognostic power of our technologies in clinical studies, seeking to improve patient care. This exciting position affords the opportunity to join a multidisciplinary team of scientists, engineers, medical oncologists, and computational biologists, spanning the Broad Institute, MIT, Harvard, and Harvard-affiliated hospitals. The successful incumbent will gain exposure to cutting-edge science through meetings, symposia, and interactions with colleagues and collaborators, and have the opportunity to establish impactful new methods.
CHARACTERISTIC DUTIES
  • Implements, optimizes, and applies novel bioinformatics methods for cancer detection and monitoring
  • Works with lab members to design, conduct, analyze, and troubleshoot experiments
  • Presents routinely at lab meetings to share project updates and discuss new ideas
  • Assists in the preparation of manuscripts to report findings to the broader community
  • Other related tasks as required

QUALIFICATIONS
  • B.S. in Bioinformatics, Computational Biology, Computer Science, or related field and a minimum of 2+ years of related experience, or M.S. with 0+ years of experience; or equivalent work experience.
  • Proficiency in R or Python required
  • Practical experience with Unix / Linux environment required
  • Experience with WDL/Cromwell or Snakemake workflow management systems preferred
  • Experience with cloud computing platforms such as Google Cloud Platform preferred
  • Experience with DNA sequencing and familiarity with molecular biology preferred
  • Experience with epigenetic sequencing methods such as bisulfite, EM-Seq, or TAPS preferred
  • Experience with Duplex Sequencing and cell-free RNA sequencing preferred
  • Experience with developing and validating cancer detection algorithms preferred
  • Excellent communication and interpersonal skills required
  • Ability to work in a fast-paced, academic environment

The expected base pay range for this position as listed above is based on a 40 hour per week schedule. Broad provides pay ranges representing its reasonable and good faith estimate of what the organization reasonably expects to pay for a position at the time of posting. Actual compensation will vary based on factors including but not limited to, relevant skills, experience, education, qualifications, and other factors permissible by law.
At Broad, your base pay is just one part of a comprehensive total rewards package. From day one, this role offers a competitive benefits package including medical, dental, vision, life, and disability insurance; a 401(k) retirement plan; flexible spending and health savings accounts; at least 13 paid holidays; winter closure; paid time off; parental and family care leave; and an employee assistance program, among other Broad benefits.
The Broad Institute is an equal opportunity employer. All qualified applicants will receive consideration for employment without regard to race, national origin, religion, age, color, sex, disability, protected veteran status, or any other characteristic protected by local, state, or federal laws, rules, or regulations.
Should you need a reasonable accommodation to complete the application or interview process, please contact recruiting@broadinstitute.org for assistance.

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