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Protein Scientist Jobs in Colorado (NOW HIRING)

Process Development Scientist Location: Denver, CO (on-site) Type: Full-time Cascade Biocatalysts ... Interface with protein engineering efforts, translating process bottlenecks into enzyme engineering ...

Process Development Scientist Location: Denver, CO (on-site) Type: Full-time Cascade Biocatalysts ... Interface with protein engineering efforts, translating process bottlenecks into enzyme engineering ...

Expert Pharma Biochemist

Louisville, CO · On-site

$40K - $54K/yr

Cogent Scientific, an insourced contract research organization, is looking for the right people to ... Characterizing protein-protein interactions between targets and engineered binders using ...

Expert Pharma Biochemist

Louisville, CO

$40K - $54K/yr

Cogent Scientific, an insourced contract research organization, is looking for the right people to ... Characterizing protein-protein interactions between targets and engineered binders using ...

Expert Pharma Biochemist

Louisville, CO · On-site

$115K - $125K/yr

Cogent Scientific, an insourced contract research organization, is looking for the right people to ... Characterizing protein-protein interactions between targets and engineered binders using ...

Sr. Principal Scientist

Denver, CO · On-site

$145 - $170/hr

... protein functionality, starch chemistry, enzyme systems, hydrocolloids, and their impact on ... scientists to solve technical challengesProven coaching and mentoring abilities that foster ...

Join Us Today The Sr. Principal Scientist serves as a scientific leader and recognized subject ... Demonstrated understanding of flour quality attributes, protein functionality, starch chemistry ...

The Sr. Principal Scientist serves as a scientific leader and recognized subject matter expert in ... Demonstrated understanding of flour quality attributes, protein functionality, starch chemistry ...

The Sr. Principal Scientist serves as a scientific leader and recognized subject matter expert in ... Demonstrated understanding of flour quality attributes, protein functionality, starch chemistry ...

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Showing results 1-20

Protein Scientist information

See Colorado salary details

$26.8K

$85.5K

$140.7K

How much do protein scientist jobs pay per year?

As of Sep 1, 2026, the average yearly pay for protein scientist in Colorado is $85,467.00, according to ZipRecruiter salary data. Most workers in this role earn between $62,128.00 and $107,783.00 per year, depending on experience, location, and employer.

What does a protein scientist do?

A Protein Scientist studies the structure, function, and properties of proteins to understand their roles in biological systems. They use techniques such as chromatography, mass spectrometry, and X-ray crystallography to analyze and modify proteins for applications in biotechnology, pharmaceuticals, and healthcare. Their work is critical in drug development, enzyme engineering, and disease research, contributing to advancements in medicine and industry.

What does a typical day look like for a protein scientist?

A typical day for a Protein Scientist often involves designing and conducting experiments to express, purify, and characterize proteins, as well as analyzing data using specialized software tools. You may spend time preparing samples, running laboratory equipment, and collaborating closely with team members across research and development, quality control, or bioprocessing departments. Documentation, presenting findings in meetings, and troubleshooting technical challenges are integral parts of the role. This dynamic environment offers the chance to contribute to novel discoveries and translates scientific breakthroughs into real-world applications.

What are the key skills and qualifications needed to thrive as a protein scientist?

To thrive as a Protein Scientist, you need a solid background in biochemistry, molecular biology, and protein expression and purification, typically supported by a relevant advanced degree such as a master's or Ph.D. Proficiency in laboratory techniques like chromatography, mass spectrometry, and familiarity with analytical software and LIMS (Laboratory Information Management Systems) is crucial. Strong problem-solving skills, meticulous attention to detail, and effective communication set outstanding candidates apart. Mastering both technical and soft skills ensures successful research outcomes, efficient teamwork, and innovation in this rapidly evolving scientific field.

How much do protein scientists make?

Protein scientists typically earn a median annual salary of around $70,000 to $100,000, depending on experience, education, and location. Senior roles or those with advanced degrees and specialized skills can earn higher salaries, often exceeding $120,000 annually.

What are some protein scientist jobs available?

Protein scientist jobs typically involve research and development in biotechnology, pharmaceuticals, or academic settings, focusing on protein structure, function, and interactions. These roles often require expertise in molecular biology, biochemistry, and laboratory techniques such as protein purification and analysis, with positions available in research institutions, biotech companies, and pharmaceutical firms.
Infographic showing various Protein Scientist job openings in Colorado as of August 2026, with employment types broken down into 1% Internship, 1% As Needed, 86% Full Time, 10% Part Time, and 2% Contract. Highlights an 89% Physical, 3% Hybrid, and 8% Remote job distribution, with an average salary of $85,467 per year, or $41.1 per hour.

Scientist I/II, Protein Engineering

Stanford Climate Ventures

Boulder, CO • On-site

$82 - $120/hr

Other

Medical, Dental, Vision, Retirement

Posted 14 days ago


Job description

About Alta

Alta Resource Technologies (Alta) is a next generation mining company that uses synthetic biology to separate critical minerals from conventional and unconventional resources, including e‑waste. Founded in 2023, the company is expanding its team in Boulder, CO. The exponential growth of new tech industries, as well as the information technology sector, are driving historic growth in mineral demand and stressing existing supply streams. Meeting new demand, diversifying the supply chain, and producing minerals in a more sustainable manner requires the rapid development, deployment and scaling of new technologies. This mineral challenge represents a historic opportunity for technology development and value creation. Alta is proud to be at the vanguard of this mega trend.

About the Role

Alta is seeking a Scientist I/II in Protein Engineering to join our Applied Biology team. This role will be responsible for developing and implementing assays for data‑driven protein design campaigns towards discovering and validating enhanced binding specificity. This role will be a key contributor to building high‑throughput screening capabilities and developing assays for ion binding and bioconjugation.

A successful candidate will have expertise in assay development that supports protein discovery workflows in small molecule, ion, or metal binding proteins. The candidate will collaborate with data scientists, strain engineers, analytics, and chemistry groups to generate robust and reliable assays that scale. The individual will join a group of collaborative scientists with diverse skill sets and must have strong communication and critical thinking skills with a rigorous approach to science.

Key Responsibilities
  • Work within a team to develop and execute high-throughput assays for protein characterization including for protein quantification, bioconjugations, and binding capacities.
  • Design and implement microtiter plate workflows for directed evolution campaigns.
  • Work with scientists for rapid turnaround of testing data to aid in novel protein discovery and leverage the outcomes for additional protein design campaigns.
  • Interpret test data and protein analysis data for guiding round‑over‑round improvements.
  • Develop and onboard novel assays for protein characterization.
  • Collaborate with strain engineers to achieve reliable microtiter production.
  • Ensure excellent practices in documentation of all protocols and experiments.
Required Qualifications
  • Ph.D. in biochemistry, molecular biology, or related field with 1‑3+ years of research experience.
  • Expertise in high-throughput protein assays and library-scale workflows.
  • Experience with metalloproteins, protein‑ion or small molecule interactions, or bioconjugate biochemistry.
  • Experience with assay analysis for modeling novel candidate leads.
  • Experience in protein discovery and directed evolution campaigns to improve protein characteristics.
  • Experience in design and implementation of automated workflows.
  • Deep knowledge of classic and state-of-the-art molecular biology and multiplex library-scale approaches to directed evolution campaigns.
  • Demonstrated knowledge of experimental design, the scientific method, and statistical analysis.
  • Strong written and verbal communication skills and ability to work within different teams.
  • Strong organizational and documentation skills.
  • U.S. citizenship is required.
Preferred Qualifications
  • Experience in bioinformatics pipelines and scripting to aid in data analysis and protein design.
  • Experience with generative protein design and structural modeling.
What We Offer
  • The opportunity to lead a breakthrough program redefining U.S. supply chain resilience in critical materials.
  • A mission-driven, high-trust team operating at the intersection of innovation, national security, and sustainability.
  • High Impact & Visibility: direct interaction and reporting to executive leadership.
Compensation & Benefits

The starting pay range for this position is $82,000 - $120,000, commensurate with educational background and work experience.

Benefits include:

  • 401(K)
  • Medical, Dental, Vision plans (or equivalent)
  • Flexible Time Off
  • Paid Parental Leave
  • Paid Sick Leave
  • Company Holidays
EOE

Alta Resource Technologies is an equal opportunity employer committed to building a workforce that reflects the diversity of the communities we serve. We believe that varied perspectives, experiences, and backgrounds strengthen our team and drive better outcomes for our clients and partners.

We welcome and encourage applications from all qualified individuals regardless of race, color, religion, gender, sexual orientation, gender identity, national origin, age, disability, veteran status, or any other characteristic protected by law. Our hiring decisions are based solely on qualifications, merit, and the needs of the business. Alta participates in e-Verify for all positions.

If you require accommodations at any point in the hiring process, please let your recruiter know.

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