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Microscopy Image Analysis Jobs (NOW HIRING)

Intuitive

Staff Machine Learning Engineer

Sunnyvale, CA · On-site

Independently lead projects to conceive, develop, and implement AI/ML approaches to extract novel insights from large-scale microscopy image data sets * Perform analysis of neural networks, propose ...

Intuitive

Staff Machine Learning Engineer

Sunnyvale, CA · On-site

Independently lead projects to conceive, develop, and implement AI/ML approaches to extract novel insights from large-scale microscopy image data sets * Perform analysis of neural networks, propose ...

Wje

Petrographer | 2+ Years

Austin, TX · On-site

We leverage multiple state-of-the-art methods, such as optical microscopy, fluorescence microscopy, image analysis, laser-induced breakdown spectroscopy (LIBS), and electrical resistivity, and have ...

Axle

Electron Microscopy Specialist

Hamilton, MT · On-site

$70K - $80K/yr

What You'll Do * Prepare biological samples for electron microscopy (fixation, embedding ... Familiarity with image analysis tools. What Makes Someone Successful in This Role * You're a team ...

Axle

Electron Microscopy Specialist

Hamilton, MT · On-site

What You'll Do * Prepare biological samples for electron microscopy (fixation, embedding ... Familiarity with image analysis tools. What Makes Someone Successful in This Role * You're a team ...

Axle

Electron Microscopy Specialist

Hamilton, MT · On-site

$70K - $80K/yr

What You'll Do * Prepare biological samples for electron microscopy (fixation, embedding ... Familiarity with image analysis tools. What Makes Someone Successful in This Role * You're a team ...

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Microscopy Image Analysis information

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How much do microscopy image analysis jobs pay per hour?

As of Sep 9, 2026, the average hourly pay for microscopy image analysis in the United States is $27.94, according to ZipRecruiter salary data. Most workers in this role earn between $24.04 and $29.81 per hour, depending on experience, location, and employer.

What is microscopy image analysis?

Microscopy image analysis is the process of extracting meaningful information from images captured through microscopes. This involves using software and computational techniques to identify, quantify, and interpret structures, patterns, or features in microscopic images. The analysis helps researchers and scientists to understand biological, material, or chemical samples at the cellular or molecular level. It is widely used in fields like biology, medicine, materials science, and nanotechnology to support research, diagnosis, and quality control.

What are the key skills and qualifications needed to thrive as a microscopy image analysis specialist?

To thrive in Microscopy Image Analysis, you need a solid background in biology, microscopy techniques, and quantitative image analysis, often supported by a degree in life sciences or biomedical engineering. Familiarity with software tools such as ImageJ, MATLAB, or Python, and experience with advanced imaging systems are typically required. Strong analytical thinking, attention to detail, and effective communication skills help professionals interpret complex data and collaborate with multidisciplinary teams. These skills ensure accurate data extraction, meaningful scientific conclusions, and high-quality research outcomes.

What are some common challenges faced in microscopy image analysis roles, and how can new team members overcome them?

Professionals in microscopy image analysis often encounter challenges such as handling large datasets, differentiating signal from noise, and adapting to rapidly evolving analysis software. New team members can overcome these hurdles by collaborating closely with biologists and software engineers, participating in regular training sessions, and staying current with the latest analytical tools. Engaging in team meetings and seeking mentorship from experienced analysts also helps build confidence and proficiency in interpreting complex imaging data.

What are popular job titles related to Microscopy Image Analysis jobs?

For Microscopy Image Analysis jobs, the most frequently searched job titles are:

Microscopy Image Analysis jobs near you
Infographic showing various Microscopy Image Analysis job openings in the United States as of August 2026, with employment types broken down into 85% Full Time, 13% Part Time, and 2% Contract. Highlights an 82% Physical, 4% Hybrid, and 14% Remote job distribution, with an average salary of $58,107 per year, or $27.9 per hour.

Ophthalmology (Instructor)

Houston, TX • On-site

Baylor College of Medicine
Colleges, Universities, and Professional Schools • 5 - 10K employees
Learn more about Baylor College of Medicineexternal

Full-time

Posted 15 days ago

Baylor College of Medicine rating

8.0

Company rating: 8.0 out of 10

Based on 24 frontline employees who took The Breakroom Quiz

191st of 633 rated colleges and universities

Job description

Ophthalmology (Instructor)
Division: Ophthalmology
Work Arrangement:
Location: Houston, TX
Salary Range:
FLSA Status: Exempt
Work Schedule:
Summary
The laboratory of Dr. Yuqing Huo in the Department of Ophthalmology at Baylor College of Medicine is seeking a highly motivated and accomplished scientist for an Instructor position. The successful candidate will develop and lead basic and translational research projects focused on the cellular and molecular mechanisms underlying retinopathy, pathological retinal angiogenesis, vascular remodeling, inflammation, and subretinal fibrosis.
A major focus of this position will be to define disease-associated cellular niches and cell-cell interactions during the development and progression of retinopathy in rodent models. The candidate will integrate single-cell and spatial omics, transcriptomic analyses, advanced imaging, and functional studies to characterize endothelial cells, macrophages and microglia, astrocytes, retinal pigment epithelial cells, pericytes, fibroblasts, and other disease-relevant cell populations. The candidate will also use two-photon microscopy and complementary retinal imaging approaches to investigate cellular dynamics, vascular responses, and neurovascular interactions in vivo.
Job Duties
  • Plans, directs, and conducts advanced research projects focused on retinopathy, pathological retinal angiogenesis, vascular remodeling, inflammation, and subretinal fibrosis.
  • Develops and applies rodent models of retinal vascular disease, including oxygen-induced retinopathy, laser-induced choroidal neovascularization, diabetic retinopathy, and other relevant models.
  • Uses single-cell RNA sequencing, spatial transcriptomics, bulk transcriptomics, proteomics, metabolomics, and related omics approaches to define cellular states, disease-associated pathways, and cellular niches in the retina and choroid.
  • Integrates transcriptomic and spatial datasets with histological, imaging, and functional measurements.
  • Applies two-photon microscopy and other advanced imaging technologies to study cellular behavior, vascular remodeling, neurovascular interactions, and disease progression in vivo.
  • Performs retinal and choroidal tissue preparation, flat-mount staining, immunofluorescence, confocal microscopy, image acquisition, and quantitative image analysis.
  • Conducts mechanistic studies involving endothelial cells, macrophages, microglia, astrocytes, retinal pigment epithelial cells, pericytes, and fibroblasts.
  • Develops computational and experimental strategies to identify cell-cell communication networks and signaling pathways within pathological retinal niches.
  • Designs and performs studies using genetically modified mice, viral-vector approaches, lineage tracing, cell-specific gene targeting, and pharmacological interventions.
  • Evaluates and analyzes experimental data and develops follow-up studies based on research findings.
  • Establishes, validates, and optimizes new research protocols and technologies required for specific research projects.
  • Summarizes research findings and prepares manuscripts for publication in high-quality peer-reviewed journals.
  • Presents research findings at laboratory meetings, departmental seminars, and national and international scientific conferences.
  • Writes and submits grant proposals and contributes to progress reports, research protocols, and collaborative funding applications.
  • Develops an independent research direction that complements the laboratory's ongoing retinal and vascular biology programs.
  • Supervises and mentors postdoctoral fellows, graduate students, research assistants, and other junior research personnel.
  • Coordinates collaborative projects involving investigators in ophthalmology, vascular biology, neuroscience, bioinformatics, imaging, and computational biology.
  • Maintains accurate research records and ensures compliance with institutional requirements for animal research, laboratory safety, data management, and research integrity.
  • Performs other job-related duties as assigned.

Minimum Qualifications
  • Education Required: Ph.D., M.D., M.D./Ph.D., or equivalent doctoral degree in ophthalmology, neuroscience, vascular biology, molecular and cellular biology, physiology, biomedical sciences, bioengineering, or a related field. Experience may not be substituted in lieu of the required degree.
  • Experience Required: A minimum of five years of relevant laboratory research experience following completion of the doctoral degree.
  • Demonstrated research productivity, including peer-reviewed publications.
  • Experience in experimental design, quantitative data analysis, scientific writing, and manuscript preparation.
  • Ability to conduct research independently and contribute effectively within a multidisciplinary research environment.
  • Strong written and verbal communication skills.
  • Experience supervising or mentoring junior research personnel.

Baylor College of Medicine is an Equal Opportunity/Affirmative Action/Equal Access Employer.
Requisition ID: 26091

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