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Microbiome Data Scientist Jobs (NOW HIRING)

Staff Scientist

Chicago, IL ยท On-site +1

Partner with wet-lab teams to connect computational predictions with microbiome and immunological data, facilitating cross-disciplinary insights and translational outcomes. * Promote open science ...

Postdoctoral Fellow

Chapel Hill, NC ยท On-site

$41K - $56K/yr

... microbiome data, would be an advantage. Ability to build algorithms and data pipelines would be ideal. Required Qualifications, Competencies, and Experience PhD in Computer Science, Bioinformatics ...

$48K - $65K/yr

Experience analyzing oral microbiome datasets (16S, shotgun metagenomics, or metatranscriptomics). Advanced programming and data science skills in R, Python, or other relevant languages. Familiarity ...

Postdoctoral Fellow

Chapel Hill, NC ยท On-site

$41K - $56K/yr

... microbiome data, would be an advantage. Ability to build algorithms and data pipelines would be ideal. Required Qualifications, Competencies, and Experience PhD in Computer Science, Bioinformatics ...

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Microbiome Data Scientist information

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$37.5K

$122.7K

$196.5K

How much do microbiome data scientist jobs pay per year?

As of Aug 16, 2026, the average yearly pay for microbiome data scientist in the United States is $122,738.00, according to ZipRecruiter salary data. Most workers in this role earn between $98,500.00 and $136,000.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a microbiome data scientist?

To thrive as a Microbiome Data Scientist, you need a strong background in bioinformatics, microbiology, statistics, and computational biology, usually supported by an advanced degree in a relevant field. Proficiency with programming languages (such as Python or R), experience with next-generation sequencing data analysis tools, and familiarity with databases like QIIME or mothur are essential. Strong problem-solving abilities, attention to detail, and effective communication skills help you interpret complex datasets and collaborate with interdisciplinary teams. These skills ensure accurate analysis, meaningful scientific insights, and impactful contributions to research and clinical applications in microbiome science.

What does a microbiome data scientist do?

A Microbiome Data Scientist specializes in analyzing complex datasets related to microbial communities, often from human, environmental, or agricultural sources. They use computational, statistical, and bioinformatics tools to interpret large-scale sequencing data, uncover patterns, and generate insights about how microbes influence health, disease, or environmental processes. Their work typically involves processing raw data, developing analytical pipelines, and collaborating with biologists and clinicians to translate findings into actionable knowledge. This role requires expertise in programming, statistics, and microbiology.

How to become a microbiome data scientist?

To become a microbiome data scientist, one typically needs a strong background in biology, microbiology, or bioinformatics, along with proficiency in programming languages such as Python or R. Gaining experience with microbiome analysis tools, statistical methods, and data visualization is essential, often through advanced degrees like a master's or Ph.D. in a related field. Certifications or training in genomics and bioinformatics can also enhance job prospects.

What are some common challenges faced by microbiome data scientists when analyzing complex biological datasets?

Microbiome Data Scientists often encounter challenges related to the high variability and complexity of biological data, such as noise, batch effects, and incomplete metadata. Integrating multi-omics datasets (e.g., metagenomics, metabolomics) and ensuring reproducibility of analyses can also be demanding. Collaborating with wet lab scientists and bioinformaticians is essential to validate findings and translate computational results into biological insights. Staying up-to-date with evolving analytical tools and best practices is crucial for success in this dynamic field.

What is the difference between Microbiome Data Scientist vs Microbiome Research Scientist?

AspectMicrobiome Data ScientistMicrobiome Research Scientist
Required CredentialsMaster's or PhD in Bioinformatics, Data Science, or related fieldsPhD in Microbiology, Biology, or related fields
Work EnvironmentData analysis, computational modeling, collaboration with bioinformatics teamsLaboratory research, experimental design, microbiome sample analysis
Employer & Industry UsageBiotech companies, research institutions, health tech firmsAcademic labs, research institutes, biotech firms

While both roles focus on microbiome studies, the Microbiome Data Scientist primarily analyzes data using computational methods, whereas the Microbiome Research Scientist conducts laboratory experiments and microbiome research. They often collaborate but have distinct skill sets and work environments.

More about Microbiome Data Scientist jobs

What cities are hiring for Microbiome Data Scientist jobs?

Cities with the most Microbiome Data Scientist job openings:

What states have the most Microbiome Data Scientist jobs?

States with the most job openings for Microbiome Data Scientist jobs include:

Infographic showing various Microbiome Data Scientist job openings in the United States as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $122,738 per year, or $59 per hour.

Scientist, Microbiome Data Science & Bioinformatics

Ferring Pharmaceuticals

Minneapolis, MN โ€ข On-site

$115K - $152K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Re-posted 3 days ago


Job description

Job Description:

As a privately-owned,biopharmaceutical company, Ferringpioneers anddeliverslife-changing therapies that help people build families and live better lives. Our independence helps us cultivate an entrepreneurial spirit and long-term perspective that enables us to achieve growth and scale, whileremainingagile and true to our 'people first' philosophy. Built on a 70-year plus commitment to science and research, Ferring is relentless in its pursuit of science that drives powerful discoveries and therapies to help people build families, stay healthy, and stand up to the world's oldest enemy: disease.

The Scientist (Microbiome Data Science & Bioinformatics) will translate large datasets into mechanistic and therapeutic hypotheses through omics analysisapproaches and create novel analytical methods. We are looking for someone who enjoys a fast-paced environment, effectively collaborates with others, and who can apply their expertise to fuel biological discoveries and analytical advancement.

With Ferring, you will be joining a recognized leader, identified as one of "The World's Most Innovative Companies" by Fast Company, and honored by Fortune with inclusion on its "Change the World List," for addressing society's unmet needs. Ferring US is also Great Places to Work Certified, distinguishing it as one of the best companies to work for in the country.

Responsibilities:

  • Lead qualitative and quantitative human microbiomeresearch, includingdata mining, dataanalyses,and interpretation of findingsfromclinical trialsand research studiesthatalign withcompanygoals
  • Create, curate and maintain datasets, databases and resources for annotation and use of complex omics data
  • Lead integrated data mining and translation of bioinformatic insights for R&D, pre-clinical and clinical initiatives
  • Conceptualize, building, test, and benchmark gold standard and novel bioinformatic methods
  • Use and improve continuous deployment models, containerization, cloud computing, and agile practices
  • Independently achieve project-specific deliverables with stakeholders (internal and external) through collaboration, requirements gathering, and timeline management
  • Contribute to publications in peer-reviewed journals, as well as any methodological innovations
  • Effectively present and defend scientific work in the form of internal and external presentations
  • Critically evaluate primary literature for design and analysis of appropriate experiments to reach timely project Go/No-Go decisions
  • Continuously learn in the fields of bioinformatics, computer science and biology including the latest methodologies, techniques, and resources

Requirements:

  • Advanced degree(e.g.MSorPh.D.)in bioinformatics, genomics, biostatistics or relatedbiologicalfield
  • Minimum of one year of experience in the field of omics sciences, preferably the microbiome
  • Proficiency in developing, deploying, and running cloud-based bioinformatic workflows
  • Proven experience in Linux, AWS, coding in Python and R
  • Excellent writing, communication, and other organizational skills including documentation & data organization
  • Proven experience in statistical computing for data mining, exploratory analysis and biomarker discovery related to the microbiome or other -omes

Ferring + you

At Ferring, we offer competitive total compensation along with an exceptional range of flexible benefits, personal support and tailored learning and development opportunities all designed to help you realize your full potential both in life and at work. From working hours that respect your lifestyle, a culture that is welcoming andequitable, and the chance to work with the industry's most impressive people, these are just some of the ways weliveour "People First" philosophy.

Our Compensation and Benefits

At Ferring,basesalary is one part of our competitive total compensation and benefits package and isdeterminedusing a salary range. The base salary range for this role is $115,000 to $152,000, which is the reasonable estimate of the base compensation for this role. The actual amount paid may differ based on non-discriminatory factors such as experience, knowledge, skills, abilities,educationand primary work location. Additional compensation for this role will be provided based on competitive annual incentive compensation targets in the form of an annual bonus - payouts are based on individual and company performance.

Benefits for this role include comprehensive healthcare (medical, dental, and vision) with a premium differential, inverse to base salary, to be paid by employees, a 401k plan and company match, short and long-term disability coverage, basic life insurance, wellness benefits, reimbursement for certain tuition expenses, sick time of 1 hour per 30 hours worked, vacation time for full time employees to accrue up to120 hoursin the first four (4) years of employment, and160 hoursin the fifth (5th) year of employment as well as15paid holidays per year.We are proud to offer paid parental leave subject to a minimum period of employment at Ferring.

Ferring is an equalopportunityemployer. All aspects of employment will be based on merit, competence, performance, and business needs. We do not discriminateon the basis ofrace, color, religion, marital status, age, national origin, ancestry, physical or mental disability, medical condition, pregnancy, geneticinformation, gender, sexual orientation, gender identity or expression, veteran status, or any other status protected under federal, state, or local laws.

Join our team and your voice will be heard, and your contributions will be valued. If you love tocome up withnew ways to make a positive difference and see them through, you will fit rightin.

We are proud to be an Affirmative Action/Equal Opportunity Employer (including Disability/Protected Veterans). Wemaintaina drug-free workplace.

Location:Roseville, Minnesota