Computer Science Engineer Jobs in Rochester, MN (NOW HIRING)

Job#: 3037006
Job Description:
Software Engineer
Location: Rochester, Minnesota (Remote)
Role Overview
We are seeking a Software Engineer to design and build back-end services for a portfolio of data-centric clinical and analytic applications. This role involves leveraging cloud computing, big data, data science, and machine learning with state-of-the-art software development frameworks. The engineer will ensure that cloud-based micro-services adhere to uptime and accuracy targets, are resilient, and can scale as data volumes and traffic increase.
Key Responsibilities

• Work with Product Owners, Product Managers, and Architects to translate requirements into code.
• Develop services related to data warehousing, big data, cloud computing, business intelligence, analytics, and machine learning.
• Participate in DevOps, Agile, and continuous development and integration frameworks.
• Program in high-level languages such as Go, Python, and Java.
• Work on deployment automation and configuration management with tools like Azure DevOps, Puppet, Chef, Ansible, CloudFormation, or Terraform.
• Design and implement a Model/Agent Communication Platform (MCP) to enable agent-to-agent communication, orchestration, and observability.
• Build and scale data pipelines supporting AI/LLM and analytics use cases.
• Develop frameworks for agent control, monitoring, and traceability.
• Integrate MCP with enterprise data platforms, APIs, and AI services.
• Support data transformation, ingestion, and orchestration workflows.
• Ensure the performance, scalability, and reliability of AI-driven data systems.

Required Qualifications
Education: A Bachelor's Degree in Computer Science/Engineering or a related field. Alternatively, an Associate's degree in a related field with two additional years of relevant experience, or a total of two years of experience coding applications or services in a high-level language (e.g., C, C++, Golang, Java, C#).
Experience: 5+ years of experience in software engineering or data engineering. Experience building data pipelines (ETL/ELT) and distributed systems or event-driven architectures is required.
Technical Skills: Strong proficiency in Python and with APIs/microservices architecture. Experience with Agile software development techniques and modern application development frameworks is necessary. Familiarity with streaming and batch processing frameworks and cloud platforms (Azure, Google Cloud Platform, AWS) is also required.
Preferred Qualifications

• Experience with MCP or similar agent communication frameworks.
• Knowledge of LLMOps or MLOps practices.
• Experience with vector databases, embeddings, or RAG architectures.
• Familiarity with CI/CD and DevOps pipelines.
• Exposure to real-time observability tools.
• Experience developing software for healthcare-related industries.
• Experience with Google and Azure cloud environments.

Data Engineer x2
Location: Rochester, Minnesota (Remote)
Role Overview
We are seeking a Data Engineer to gain access to data across the organization and provide ongoing analysis by monitoring, profiling, and analyzing databases. This role requires a mix of functional, data, and technical skills. The hire will be responsible for expanding and optimizing data architecture, as well as optimizing data flow and collection for cross-functional teams. The ideal candidate is an experienced data pipeline builder and data wrangler who enjoys optimizing data systems.
Key Responsibilities

• Assemble large, complex data sets that meet functional and non-functional business requirements.
• Perform complex data analysis and investigation for customer requests to explain results and make appropriate recommendations.
• Build processes supporting data transformation, data structures, metadata, dependency, and workload management.
• Analyze business objectives and develop data solutions to meet customer needs.
• Improve and customize current data solutions to meet business requirements.
• Research new and existing data sources to contribute to new development and improve data management processes.
• Perform periodic data quality reviews for internal and external data.
• Complete final configuration and hardening of the Globus Connect Server (GCS v5) deployment on Google Cloud Platform Compute Engine VMs.
• Onboard initial research user groups to the Globus platform and provide hands-on support.
• Monitor and maintain Globus Connect Server VM health, GCS services, and Google Cloud Platform bucket lifecycle policies.
• Produce comprehensive technical documentation such as runbooks, SOPs, and architecture diagrams.

Required Qualifications
Education: Bachelor's degree in Computer Science or Engineering, or an Associate's degree in Computer Science or Engineering with two (2) years of relevant experience.
Experience: 3+ years of hands-on experience with the Globus platform, including Globus Connect Server v5 deployment, configuration, and administration. Demonstrated ability to analyze and profile data through advanced data modeling or data mining techniques.
Technical Skills:

• Strong knowledge of SQL, including writing and troubleshooting queries for data mining.
• Understanding of ETL processes, data modeling concepts, and data systems.
• Deep understanding of the Globus ecosystem: endpoints, collections, storage gateways, and connectors (S3, POSIX).
• Experience with GridFTP protocol for large-scale transfers.
• Hands-on experience with Google Cloud Platform Compute Engine and Google Cloud Platform Cloud Storage (S3-compatible buckets).
• Strong Linux administration skills, including shell scripting (Bash).
• Understanding of network protocols (TCP/IP, HTTPS, GridFTP, DNS) and firewall configuration.
• Broad understanding of Managed File Transfer (MFT) principles.

Preferred Qualifications

• Experience deploying Globus in a healthcare or regulated environment (HIPAA, NIST).
• Familiarity with Azure DevOps (ADO) for configuration management.
• Experience with Terraform or other Infrastructure as Code tools.
• Knowledge of Sailpoint or similar identity governance platforms.
• Experience with Entra ID (Azure AD) federation and SSO integration.
• Familiarity with High-Performance Computing (HPC) environments.
• Experience with monitoring tools such as Prometheus, Grafana, or Google Cloud Platform Cloud Monitoring.
• Familiarity with other MFT tools like Signiant or Cleo.

Other Requirements

• A self-directed problem solver who can identify issues and research solutions independently.
• A strong communicator able to explain complex technical concepts to various audiences.
• A customer-oriented individual comfortable working directly with users to troubleshoot issues.
• A proactive professional who anticipates operational needs and identifies process improvements.

EEO Employer
Apex Systems is an equal opportunity employer. We do not discriminate or allow discrimination on the basis of race, color, religion, creed, sex (including pregnancy, childbirth, breastfeeding, or related medical conditions), age, sexual orientation, gender identity, national origin, ancestry, citizenship, genetic information, registered domestic partner status, marital status, disability, status as a crime victim, protected veteran status, political affiliation, union membership, or any other characteristic protected by law. Apex will consider qualified applicants with criminal histories in a manner consistent with the requirements of applicable law. If you have visited our website in search of information on employment opportunities or to apply for a position, and you require an accommodation in using our website for a search or application, please contact our Employee Services Department at or .
Everforth Apex is a world-class IT services company that serves thousands of clients across the globe. When you join Everforth Apex, you become part of a team that values innovation, collaboration, and continuous learning. We offer quality career resources, training, certifications, development opportunities, and a comprehensive benefits package. Our commitment to excellence is reflected in many awards, including ClearlyRateds Best of Staffing in Talent Satisfaction in the United States and Great Place to Work in the United Kingdom and Mexico.
Everforth Apex uses a virtual recruiter as part of the application process. Click for more details. By applying for this job, you agree to receive calls, AI-generated calls, text messages, or emails from Everforth Apex and its affiliates, and contracted partners. Frequency varies for text messages. Message and data rates may apply. Carriers are not liable for delayed or undelivered messages. You can reply STOP to cancel and HELP for help. You can access our privacy policy at
Everforth Apex Benefits Overview: Everforth Apex offers a range of supplemental benefits, including medical, dental, vision, life, disability, and other insurance plans that offer an optional layer of financial protection. We offer an ESPP (employee stock purchase program) and a 401K program which allows you to contribute typically within 30 days of starting, with a company match after 12 months of tenure. Everforth Apex also offers a HSA (Health Savings Account on the HDHP plan), a SupportLinc Employee Assistance Program (EAP) with up to 8 free counseling sessions, a corporate discount savings program and other discounts. In terms of professional development, Everforth Apex hosts an on-demand training program, provides access to certification prep and a library of technical and leadership courses/books/seminars once you have 6+ months of tenure, and certification discounts and other perks to associations that include CompTIA and IIBA. Everforth Apex has a dedicated customer service team for our Consultants that can address questions around benefits and other resources, as well as a certified Career Coach. You can access a full list of our benefits, programs, support teams and resources within our 'Welcome Packet' as well, which an Everforth Apex team member can provide.
Everforth Apex Systems is an equal opportunity employer. We do not discriminate or allow discrimination on the basis of race, color, religion, creed, sex (including pregnancy, childbirth, breastfeeding, or related medical conditions), age, sexual orientation, gender identity, national origin, ancestry, citizenship, genetic information, registered domestic partner status, marital status, disability, status as a crime victim, protected veteran status, political affiliation, union membership, or any other characteristic protected by law. Everforth Apex will consider qualified applicants with criminal histories in a manner consistent with the requirements of applicable law.
If you require an accommodation under the Americans with Disabilities Act to participate in an interview with a virtual recruiter or to use our website for a search or application, please contact our Benefits Department at or . Please note that this contact information is strictly to be used for medical ADA accommodations and that no other inquiries will be answered.
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