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Computational Chemistry Software Developer Jobs in Seattle, WA

Danaher

Software Engineer Internships

Tacoma, WA · On-site

Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering, Biomedical Engineering (with computational focus), or related field * Preference for students ...

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All JobsComputational Chemistry Software Developer JobsComputational Chemistry Software Developer Jobs in Seattle, WA

Computational Chemistry Software Developer information

See Seattle, WA salary details

$54.6K

$127.3K

$188.9K

How much do computational chemistry software developer jobs pay per year?

As of Aug 11, 2026, the average yearly pay for computational chemistry software developer in Seattle, WA is $127,283.00, according to ZipRecruiter salary data. Most workers in this role earn between $102,400.00 and $147,900.00 per year, depending on experience, location, and employer.

What is the difference between Computational Chemistry Software Developer vs Computational Chemist?

AspectComputational Chemistry Software DeveloperComputational Chemist
Required CredentialsBachelor's or Master's in Chemistry, Computer Science, or related fieldBachelor's or Master's in Chemistry, Chemical Engineering, or related field
Work EnvironmentSoftware development teams, research labs, tech companiesResearch labs, academic institutions, pharmaceutical companies
Employer & Industry UsageTech firms, software companies, scientific research organizationsPharmaceuticals, academia, chemical industries
Common Search & ComparisonYesYes

While both roles involve chemistry and computational skills, Computational Chemistry Software Developers focus on creating and maintaining software tools used by chemists, whereas Computational Chemists primarily conduct research and simulations to understand chemical phenomena. The roles often overlap in skills but differ in daily tasks and focus areas.

What is a computational chemistry software developer?

Computational Chemistry Software Developers are professionals who design, build, and maintain software tools used for modeling and simulating chemical systems. They combine expertise in chemistry, computer science, and mathematics to create programs that help researchers understand molecular structures, reactions, and properties. These developers work closely with scientists to implement algorithms, optimize code performance, and ensure software usability for various computational chemistry applications. Their work supports advancements in fields like drug discovery, materials science, and chemical engineering.

What are the key skills and qualifications needed to thrive as a computational chemistry software developer?

To thrive as a Computational Chemistry Software Developer, you need a strong background in computational chemistry, programming (particularly in languages like Python, C++, or Fortran), and a relevant degree in chemistry, physics, or computer science. Familiarity with molecular modeling packages, high-performance computing environments, and version control systems such as Git is typically required. Critical thinking, teamwork, and effective communication are crucial soft skills for collaborating with interdisciplinary teams and translating scientific requirements into robust software solutions. These skills and qualifications are vital for developing reliable, efficient software tools that advance chemical research and innovation.

What are some common challenges faced by computational chemistry software developers when integrating new algorithms into existing software platforms?

Computational Chemistry Software Developers often encounter challenges when integrating new algorithms, such as ensuring compatibility with legacy code, maintaining software performance, and validating scientific accuracy. Balancing the need for cutting-edge features with stability and user-friendliness can be complex, especially in collaborative, multidisciplinary teams. Regular communication with chemists and end-users is crucial to understand requirements and to troubleshoot issues that may arise during implementation.
What are popular job titles related to Computational Chemistry Software Developer jobs in Seattle, WA? For Computational Chemistry Software Developer jobs in Seattle, WA, the most frequently searched job titles are:
What job categories do people searching Computational Chemistry Software Developer jobs in Seattle, WA look for? The top searched job categories for Computational Chemistry Software Developer jobs in Seattle, WA are:
Computational Chemistry Software Developer jobs near you
Infographic showing various Computational Chemistry Software Developer job openings in Seattle, WA as of August 2026, with employment types broken down into 81% Full Time, 9% Part Time, 2% Temporary, and 8% Contract. Highlights an 91% In-person, 2% Hybrid, and 7% Remote job distribution, with an average salary of $127,283 per year, or $61.2 per hour.

AI Research Scientist --Generative AI for Materials Discovery

Meta

Redmond, WA

$154K/yr

Full-time

Re-posted 26 days ago

Meta rating

7.8

Company rating: 7.8 out of 10

Based on 45 frontline employees who took The Breakroom Quiz

136th of 242 rated software companies

Job description

Meta’s Reality Labs Research (RL-R) brings together a team of researchers, developers, and engineers to create the future of Mixed Reality (MR), Augmented Reality (AR), and Wearable Artificial Intelligence (AI). The Materials and Systems Innovation (MSI) group within Reality Labs Research creates and accelerates breakthrough materials and device technologies that unblock the path to low-cost, all-day wearable AR devices and advanced sensing and actuating systems for robotics. We identify key technology gaps requiring step-change innovation, build AI-driven autonomous discovery pipelines to compress development timelines, leverage external partners to accelerate research, and deliver high-quality technology solutions through cross-functional, high-performing teams.In this role, you will pioneer the application of generative AI to design novel compounds and molecular crystals, directly accelerating the discovery of next-generation materials for AR/VR devices and advanced robotic systems. Working at the frontier of deep generative modeling, computational chemistry, and agentic AI, you will develop and deploy state-of-the-art models — including diffusion models, flow matching, and transformer-based architectures — that predict and generate stable crystal structures and molecular candidates with target properties. Your work will be tightly integrated into our AI-driven autonomous discovery platform, collaborating with computational chemists and AI agent scientists to close the loop from molecular design to experimental validation.Together, we are going to build advanced prototypes, technologies, and toolsets that can advance how people interact with their surroundings. We invite you to join us as we work to bring these technologies from research to reality.
AI Research Scientist —Generative AI for Materials Discovery Responsibilities:
  • Develop, train, and deploy generative models (diffusion models, flow matching, variational autoencoders, transformer-based architectures) for molecular and crystal structure generation, property-conditioned design, and crystal structure prediction (CSP)
  • Design and implement reinforcement learning and alignment strategies (e.g., physics-informed reward signals from machine-learned interatomic potentials) to steer generative models toward physically stable and synthesizable candidates
  • Build foundational models and scalable pretraining pipelines that unify generative and predictive learning across molecules and crystalline materials, handling both discrete atom types and continuous 3D geometries
  • Collaborate closely with computational chemists to integrate first-principles calculations (DFT, force fields), molecular dynamics simulations, and domain-specific constraints into generative workflows
  • Partner with AI agent scientists to embed generative molecular design capabilities into LLM-based multi-agent systems, enabling closed-loop autonomous experiment planning, candidate generation, and decision making
  • Curate, preprocess, and manage large-scale molecular and crystal structure datasets for model training and benchmarking
  • Establish rigorous evaluation frameworks — measuring validity, novelty, uniqueness, stability, and synthesizability of generated structures — and benchmark against state-of-the-art methods
  • Contribute to the architecture and roadmap of the autonomous materials-discovery platform, ensuring generative design modules interface seamlessly with robotic workcells, characterization instruments, and data infrastructure

Minimum Qualifications:
  • Bachelor's degree in Computer Science, Computer Engineering, relevant technical field, or equivalent practical experience
  • Ph.D. degree in Machine Learning, Computational Chemistry, Materials Science, Chemical Engineering, Physics, or a closely related technical field
  • 3+ years of research experience in generative modeling applied to molecular systems, crystal structures, or materials science (academic or industry)
  • Familiarity with large-scale molecular and crystal databases and data processing pipelines for chemical data
  • Demonstrated expertise in deep generative models — including diffusion models, flow matching / continuous normalizing flows, variational autoencoders, or autoregressive models — with applications to 3D molecular or crystal structure generation
  • Programming proficiency in Python with hands-on experience in PyTorch or JAX
  • proficiency in building, training, and evaluating large-scale deep learning models
  • Track record of first-author publications in top-tier ML or computational chemistry venues (e.g., NeurIPS, ICML, ICLR, JACS, Nature Computational Science, Digital Discovery)
  • Solid understanding of crystallography fundamentals— and molecular representations (molecular graphs, SMILES, 3D conformers)

Preferred Qualifications:
  • Experience integrating ML models into agentic AI frameworks or LLM-based multi-agent systems for autonomous scientific discovery
  • Hands-on experience with computational chemistry tools and simulation frameworks (DFT codes such as VASP/Gaussian, molecular dynamics with LAMMPS/OpenMM/ASE, force field development)
  • Experience with crystal structure prediction (CSP) pipelines, including lattice energy ranking and structure relaxation using machine-learned interatomic potentials
  • Demonstrated ability to collaborate across disciplines — bridging ML research with experimental chemistry, materials science, and software engineering teams
  • Experience building or fine-tuning foundation models (100M+ parameters) for chemical or materials domains, including multimodal architectures that jointly handle molecular graphs, 3D coordinates, and periodic lattice structures
  • Knowledge of geometric deep learning, equivariant neural networks, or graph neural networks for molecular property prediction
  • Familiarity with reinforcement learning or RLHF-style alignment techniques applied to molecular or materials generation

About Meta:
Meta builds technologies that help people connect, find communities, and grow businesses. When Facebook launched in 2004, it changed the way people connect. Apps like Messenger, Instagram and WhatsApp further empowered billions around the world. Now, Meta is moving beyond 2D screens toward immersive experiences like augmented and virtual reality to help build the next evolution in social technology. People who choose to build their careers by building with us at Meta help shape a future that will take us beyond what digital connection makes possible today—beyond the constraints of screens, the limits of distance, and even the rules of physics.
Meta is proud to be an Equal Employment Opportunity and Affirmative Action employer. We do not discriminate based upon race, religion, color, national origin, sex (including pregnancy, childbirth, or related medical conditions), sexual orientation, gender, gender identity, gender expression, transgender status, sexual stereotypes, age, status as a protected veteran, status as an individual with a disability, or other applicable legally protected characteristics. We also consider qualified applicants with criminal histories, consistent with applicable federal, state and local law. Meta participates in the E-Verify program in certain locations, as required by law. Please note that Meta may leverage artificial intelligence and machine learning technologies in connection with applications for employment.
Meta is committed to providing reasonable accommodations for candidates with disabilities in our recruiting process. If you need any assistance or accommodations due to a disability, please let us know at accommodations-ext@meta.com.
$154,000/year to $217,000/year + bonus + equity + benefits
Individual compensation is determined by skills, qualifications, experience, and location. Compensation details listed in this posting reflect the base hourly rate, monthly rate, or annual salary only, and do not include bonus, equity or sales incentives, if applicable. In addition to base compensation, Meta offers benefits. Learn more about benefits at Meta.

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