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Biomedical Software Engineer Jobs in Madison, WI

Software Engineering Manager

Windsor, WI · Hybrid

$135K - $160K/yr

We are looking for a Software Engineering Manager to lead a multi-domain software team building ... Instrument control, agricultural technology, or biomedical device industry * Agile/Scrum ...

Software Engineering Manager

Windsor, WI · On-site +1

$135K - $160K/yr

We are looking for a Software Engineering Manager to lead a multi-domain software team building ... Instrument control, agricultural technology, or biomedical device industry * Agile/Scrum ...

Software Engineering Manager

Windsor, WI · On-site +1

$135K - $160K/yr

We are looking for a Software Engineering Manager to lead a multi-domain software team building ... Instrument control, agricultural technology, or biomedical device industry * Agile/Scrum ...

... Bioinformatics, Biomedical Engineering or related field * Strong background in quantitative ... Familiarity with software development life cycle and best practices * Detail-oriented with strong ...

... Bioinformatics, Biomedical Engineering or related field * Strong background in quantitative ... Familiarity with software development life cycle and best practices * Detail-oriented with strong ...

Senior Data Scientist

Madison, WI · On-site

$120 - $170/hr

... Bioinformatics, Biomedical Engineering or related field * Strong background in quantitative ... Familiarity with software development life cycle and best practices * Detail-oriented with strong ...

System Architect

Madison, WI · On-site

$244K/yr

Stay close to the hardware and software-leading from the front during integration, debug, and ... Biomedical Engineering, or similar). * 15+ years of experience designing and developing complex ...

... software, from initiation through closure. - Leads risk assessment for technical and project ... Education & Experience - Bachelors degree in Engineering, Biomedical Engineering, Computer Science ...

Biomedical Software Engineer information

See Madison, WI salary details

$64K

$148.6K

$207.1K

How much do biomedical software engineer jobs pay per year?

As of Aug 29, 2026, the average yearly pay for biomedical software engineer in Madison, WI is $148,649.00, according to ZipRecruiter salary data. Most workers in this role earn between $120,900.00 and $174,300.00 per year, depending on experience, location, and employer.

What is a biomedical software engineer?

A Biomedical Software Engineer develops software solutions for medical and healthcare applications, including medical devices, diagnostic tools, and research simulations. They combine biomedical knowledge with software development skills to create and maintain systems that improve patient care, enhance medical research, and ensure regulatory compliance. Their work often involves programming, data analysis, and collaboration with healthcare professionals and researchers.

What does a biomedical software engineer do?

Biomedical Software Engineers often work on designing, developing, and maintaining software used in medical devices, clinical diagnostics, or healthcare information systems. Typical responsibilities include coding new features, troubleshooting and resolving software issues, ensuring compliance with medical standards, and participating in quality assurance testing. You may also collaborate closely with clinicians, researchers, and regulatory specialists to align technological solutions with user needs and safety requirements. These projects frequently involve iterative development and rigorous validation to ensure reliability in real-world medical settings.

What skills and qualifications are needed to be a biomedical software engineer?

To thrive as a Biomedical Software Engineer, you need a strong background in computer science, biomedical engineering, and software development—often supported by a bachelor's or master's degree in a related field. Proficiency with programming languages such as Python, C++, or Java, familiarity with medical imaging tools, and experience working with healthcare interoperability standards like HL7 or DICOM are typically required. Effective communication, teamwork, and problem-solving skills are crucial for collaborating with cross-functional teams and understanding user requirements. These competencies ensure that biomedical software solutions are safe, compliant, and meet the complex needs of healthcare environments.

Infographic showing various Biomedical Software Engineer job openings in Madison, WI as of August 2026, with employment types broken down into 83% Full Time, 12% Part Time, 2% Temporary, and 3% Contract. Highlights an 83% Physical, 4% Hybrid, and 13% Remote job distribution, with an average salary of $148,649 per year, or $71.5 per hour.

Software Engineering Manager

Windsor, WI • Hybrid

Genus PLC
Animal Farming • 1 - 5K employees

$135K - $160K/yr

Full-time

Medical, Dental, Vision, Retirement

Re-posted 11 days ago


Job description

Genus PLC has an exciting opportunity. We are looking for a Software Engineering Manager to lead a multi-domain software team building embedded firmware, HMI/SCADA systems, instrument applications, and cloud-connected mobile/web platforms for cutting-edge agricultural equipment. As part of the Biosystems Engineering R&D organization, you will drive technical vision, team growth, and delivery excellence across a full-stack, AI-infused product portfolio.

The successful candidate is a forward-thinking, strategic leader who thrives at the intersection of real-time systems and modern application development. They rigorously evaluate possibilities, make pragmatic tradeoffs, and maintain a big-picture perspective while driving innovation. This individual brings strong people leadership, takes ownership, and is a clear, influential communicator who builds effective relationships and partnerships across a dynamic, cross-functional, multidisciplinary organization. Energized by harnessing AI to accelerate engineering outcomes, they proactively identify and pursue opportunities to advance innovation within the R&D pipeline.

This is a hybrid role in the Windsor, WI area with a minimum requirement of three (3) days a week on-site. 

The salary range for this position is $135,000 - $160,000 USD. The salary provided is a good faith estimate representative of all experience levels. Genus considers several factors when extending an offer, including but not limited to, the role, function and associated responsibilities, a candidate’s work experience, location, education/training, and key skills. 


  • Represent Software Engineering in cross-functional R&D core teams delivering complete instrument and automation products.
  • Lead a software organization spanning embedded firmware, HMI/SCADA, instrument control applications, and mobile/web platforms.
  • Define and own the technical roadmap — architecture, platform strategy, AI integration, and shared services across domains.
  • Partner with senior engineers and product management to translate customer, business, and regulatory requirements into actionable software backlogs and delivery plans.
  • Drive Agile/Scrum execution across multiple workstreams, maintaining clear visibility into status, quality metrics, risks, and deployment readiness.
  • Provide hands-on technical mentorship: performance management, coaching, career development, code review culture, and continuous feedback.
  • Champion an AI-augmented engineering practice — leveraging LLM-assisted development, AI-powered testing, automated code review, and data-driven optimization where appropriate.
  • Own the controlled software deployment lifecycle from lab to production floor, including versioned firmware release, over-the-air updates, and rollback strategies.
  • Build and evolve CI/CD pipelines promoting automation, quality gates, containerized builds, and release-driven deployment across embedded and application stacks.
  • Lead adoption of strategic technologies, modern architectures, and best practices to keep the organization competitive.
  • Ensure compliance with technical standards, regulatory requirements (FDA, IEC 62304, ISO, GDPR/data privacy), security, and safety protocols.
  • Uphold Genus core values, mission, and vision.

Basic Qualifications: (required)

  • A University  degree in Computer Science, Electrical Engineering, or a STEM discipline
    • A minimum of 10 years of professional software development experience:
    • A minimum of 3 years leading, managing, and growing teams of software engineers
  • Hands-on experience in at least two of these domains:
    • Embedded systems / firmware / RTOS (C, C++, Rust)
    • HMI / SCADA / industrial automation / PLC integration
    • Web and/or mobile application development (React, Angular, Flutter, etc.)
    • Cloud-connected / IoT instrument applications
    • Instrument control, agricultural technology, or biomedical device industry
  • Agile/Scrum methodology with experience defining "Definition of Done" and delivery ceremonies
  • Proficiency in at least two languages including C/C++ and a modern language (TypeScript/Python/Go/Java)
  • Authorized to work in the U.S. without sponsorship

Preferred Qualifications:

  • Master's degree in a relevant field
  • Experience integrating AI/ML capabilities into products or engineering workflows (LLM tooling, vision systems, predictive analytics, edge AI)
  • Web framework experience: React, Angular, Vue, or equivalent
  • Mobile framework experience: Flutter, React Native, Swift, Kotlin
  • SCADA/industrial protocol experience: Modbus, OPC UA, BACnet, MQTT
  • Real-time operating systems: FreeRTOS, Zephyr, Linux kernel development
  • OT/IT security practices for embedded and connected devices (IEC 62443)
  • CI/CD platforms: GitHub Actions, GitLab CI, Azure DevOps, Jenkins
  • Infrastructure as Code and cloud platforms (AWS, Azure, GCP)
  • Experience with Jira, Confluence, and GIT
  • Track record of building and scaling DevOps/Platform Engineering practices
  • Experience on multi-disciplinary product teams spanning hardware, mechanical, data science, and software

Genus is an agricultural biotechnology pioneer. We are a global FTSE 250 company, headquartered in the UK, and listed on the London Stock Exchange.  Genus PLC has a presence in over 70 countries and a global workforce of over 3,000 employees and growing.  We are a worldwide leader in porcine and bovine animal genetics, partnering with farmers to transform how we nourish the world – a mission that is important to a sustainable future. 

Our vision is clear: Pioneering animal genetic improvement to sustainably nourish the world.

 

ABS Global is a Genus company and is the world-leading provider of bovine genetics, reproductive services, technologies and udder care products.  Marketing in more than 70 countries around the globe, ABS has been at the forefront of animal genetics and technology since its founding in 1941.  We are uniquely positioned as a global player with a dedicated research and development function and an international distribution network.  We breed and distribute the genes of the world’s best bulls, scientifically selecting livestock whose offspring is designed to increase the profitability of our customers who are some of the world’s biggest farmers and food producers. 

IntelliGen Technologies is the technology within ABS that develops sexed bovine genetics that helps customers maximize their profitability and reach their end goals in a fast and efficient manner.


US - At Genus, we offer a competitive salary. Benefits include health, dental, vision, FSA/HSA, long and short-term disability, 401K, tuition reimbursement, paid holidays and ETO (earned time off). This position will provide opportunities for growth.  


Genus is an equal opportunity employer. In accordance with anti-discrimination law, it is the purpose of this policy to effectuate these principles and mandates. Genus prohibits discrimination and harassment of any type and affords equal employment opportunities to employees and applicants without regard to race, color, religion, sex, sexual orientation, gender identity or expression, pregnancy, age, national origin, disability status, genetic information, protected veteran status, or any other characteristic protected by law. Genus conforms to the spirit as well as to the letter of all applicable laws and regulations.


Genus plc will never ask you to provide fees or payment for computers, software, or other equipment or supplies during the recruitment and/or onboarding process. If you have any questions about your individual application, please contact the Genus Talent Acquisition team at recruiting@genusplc.com.