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Bioinformatics Programmer Analyst Jobs in Newark, CA

Arcus Biosciences

Bioinformatics Engineer

Hayward, CA · On-site

$120K - $155K/yr

The engineer will join highly technical, interdisciplinary teams and bring a creative, problem ... Proficiency in R and/or Python for bioinformatics pipelines and analysis. * Experience with a ...

MyOme

Bioinformatics Software Engineer

San Francisco, CA · On-site

$130K - $160K/yr

As a Bioinformatics Software Engineer, you will build scalable, cloud-based pipelines that power genomic and clinical data analysis in a real-world healthcare setting. You will combine strong ...

Mithrl

Bioinformatics Engineer, Pipelines

San Francisco, CA · On-site

$150K - $200K/yr

Scientists ask questions in natural language, and Mithrl responds with analysis, novel targets ... ABOUT THE ROLE We are looking for a Lead Bioinformatics Pipeline Engineer to build and scale Mithrl ...

Mithrl

Bioinformatics Engineer, Pipelines

San Francisco, CA · On-site

$150K - $200K/yr

Scientists ask questions in natural language, and Mithrl responds with analysis, novel targets ... ABOUT THE ROLE We are looking for a Lead Bioinformatics Pipeline Engineer to build and scale Mithrl ...

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Bioinformatics Programmer Analyst information

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How much do bioinformatics programmer analyst jobs pay per hour?

As of Aug 12, 2026, the average hourly pay for bioinformatics programmer analyst in Newark, CA is $52.28, according to ZipRecruiter salary data. Most workers in this role earn between $40.58 and $63.56 per hour, depending on experience, location, and employer.

What is a bioinformatics programmer analyst?

A Bioinformatics Programmer Analyst is a professional who combines knowledge of biology, computer science, and statistics to manage, analyze, and interpret complex biological data, often using programming and software development skills. They typically work with large datasets such as genomic sequences, gene expression profiles, or proteomics data to derive meaningful insights for research or clinical applications. Their role often involves developing software tools, writing scripts for data analysis, and collaborating with biologists and other scientists to solve research problems. Bioinformatics Programmer Analysts are essential in fields like genomics, pharmaceutical research, and personalized medicine.

What are some common challenges faced by bioinformatics programmer analysts when integrating new data types into existing pipelines?

Bioinformatics Programmer Analysts often encounter challenges such as data heterogeneity, inconsistent formats, and varying quality when integrating new data types into established analysis pipelines. Addressing these issues requires careful data preprocessing, validation, and sometimes developing custom scripts or modules to ensure compatibility. Collaboration with biologists and data scientists is essential to understand the context of the new data and to tailor solutions that maintain the reliability and reproducibility of results. Staying adaptable and up-to-date with evolving bioinformatics tools and standards also helps in overcoming these integration challenges.

What are the key skills and qualifications needed to thrive as a bioinformatics programmer analyst?

To thrive as a Bioinformatics Programmer Analyst, you need strong programming skills (such as Python, R, or Perl), a background in biology or bioinformatics, and typically a bachelor's or master's degree in a relevant field. Familiarity with bioinformatics tools, databases (like NCBI, Ensembl), and experience using Linux environments and version control systems (like Git) are essential. Analytical thinking, problem-solving abilities, and effective communication are crucial soft skills for interpreting data and collaborating with research teams. These competencies are vital for accurately analyzing biological data and delivering actionable insights in research or clinical settings.

What is the difference between Bioinformatics Programmer Analyst vs Bioinformatics Data Scientist?

AspectBioinformatics Programmer AnalystBioinformatics Data Scientist
Required CredentialsBachelor's in Bioinformatics, Computer Science, or related field; programming skillsBachelor's or Master's in Bioinformatics, Data Science, or related; strong statistical and programming skills
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, biotech firms, healthcare analytics
Employer & Industry UsageUsed in biotech, pharma, healthcare for data analysis and software development

The Bioinformatics Programmer Analyst primarily focuses on developing software tools and analyzing biological data using programming skills. In contrast, the Bioinformatics Data Scientist emphasizes statistical analysis and data modeling to interpret complex biological datasets. Both roles require strong programming knowledge and are common in biotech and healthcare industries, but their core responsibilities differ in software development versus data analysis.

What are popular job titles related to Bioinformatics Programmer Analyst jobs in Newark, CA? For Bioinformatics Programmer Analyst jobs in Newark, CA, the most frequently searched job titles are:
What cities near Newark, CA are hiring for Bioinformatics Programmer Analyst jobs? Cities near Newark, CA with the most Bioinformatics Programmer Analyst job openings:
Bioinformatics Programmer Analyst jobs near you
Infographic showing various Bioinformatics Programmer Analyst job openings in Newark, CA as of August 2026, with employment types broken down into 1% Internship, 83% Full Time, 10% Part Time, and 6% Contract. Highlights an 81% Physical, 9% Hybrid, and 10% Remote job distribution, with an average salary of $108,734 per year, or $52.3 per hour.

Bioinformatics Engineer

The Select Group

South San Francisco, CA • On-site

Full-time

Re-posted 3 days ago

Job description

BIOINFORMATICS ENGINEER | SAN FRANCISCO, CA
The Select Group is seeking a Bioinformatics Engineer to join one of our top biotechnology partners in the Fortune 100. This team works with next gen sequencing and diagnostic instruments that help detect lung cancer and reproductive diseases. This person will be working on the bioinformatics pipeline and will be testing existing and new features on the next gen sequencing applications/platforms. Note, working hours will be 9:00am-5:00pm PST.
BIOINFORMATICS ENGINEER REQUIREMENTS
  • Bachelors Degree and 5+ years of relevant work experience OR Masters Degree and 3+ years of relevant experience OR PhD and 2+ years of relevant experience
    • Degree should be in Bioinformatics, Chemistry, Biology, Biochemistry, Computational Science, or a similar scientific field
  • 3 years of coding experience and proficiency with at least 1 language (preference on Python)
  • Familiarity and experience with Linux command lines
  • Prior experience with next gen sequencing
  • Must have documentation experience (likely will not be listed on resume)
  • Soft skills: detail oriented, team player, flexible, able to work in fast paced environments

Bonus skills:
  • Oncology experience (huge plus)
  • FDA Compliance 21 CFR documentation experience
  • Test development experience with Java
  • Experience with Selenium
  • Familiarity with mapping algorithm development

BIOINFORMATICS ENGINEER RESPONSIBILITIES
  • Analyze the requirements for data analysis pipelines and visualizations to support various applications (Oncology, Reproseq, Immuno-oncology, CarrierSeq etc) and translate them to software specifications.
  • Help software development team to understand and design the complex Informatics and Data Visualization features. Work closely with developers to implement software features
  • Write and execute test protocols to validate the features and data analysis pipelines
  • Troubleshooting the data analysis pipeline and software issues.
  • Check the correctness of output Compare output data with other equivalent systems
  • Perform system performance profiling
  • Perform test automation with Python and Java
  • Prepare FDA submission documentation when needed
  • Collaborate with cross functional team

TSG is an equal opportunity employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, or status as a protected veteran.
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