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Bioinformatics Engineering Jobs in Portland, OR (NOW HIRING)

Bachelor's degree in Computer Science, Bioinformatics, Data Science, Engineering, Life Sciences, or related field * At least 5 years of professional experience working on production-grade software or ...

Computational Biologist 1

Portland, OR ยท On-site

$90 - $130/hr

High-level competency in an appropriate programming language (R or Python ideally) * An ... PhD's Degree in Computational Biology, Bioinformatics or related field * Experience with or ...

Bioinformatics Engineering information

See Portland, OR salary details

$45.6K

$139K

$252.9K

How much do bioinformatics engineering jobs pay per year?

As of Sep 5, 2026, the average yearly pay for bioinformatics engineering in Portland, OR is $138,982.00, according to ZipRecruiter salary data. Most workers in this role earn between $101,800.00 and $166,500.00 per year, depending on experience, location, and employer.

What is a bioinformatics engineer?

A bioinformatics engineer is a professional who develops and applies computational tools and techniques to analyze and interpret biological data, such as DNA sequences or protein structures. They combine expertise in computer science, biology, and mathematics to create software, manage databases, and solve complex biological problems. Bioinformatics engineers often work in research, pharmaceuticals, healthcare, and biotechnology industries to help advance scientific discoveries and medical innovations.

What are the key skills and qualifications needed to thrive as a bioinformatics engineer?

To thrive as a Bioinformatics Engineer, you need a solid background in biology, computer science, and statistics, often supported by a degree in bioinformatics or a related field. Familiarity with programming languages like Python or R, experience with bioinformatics tools (e.g., BLAST, GATK), and proficiency with databases and cloud computing platforms are typically required. Strong problem-solving, analytical thinking, and collaboration skills set standout professionals apart in this interdisciplinary field. These competencies are crucial for effectively analyzing complex biological data and driving innovation in life sciences research.

How do bioinformatics engineers typically collaborate with biologists and data scientists in a research setting?

Bioinformatics engineers frequently work in cross-disciplinary teams, partnering closely with biologists to understand experimental goals and with data scientists to analyze complex datasets. Effective communication is key, as engineers must translate biological questions into computational workflows and interpret results in a way that is meaningful to non-technical team members. This collaborative approach not only accelerates research but also helps engineers gain a deeper understanding of biological processes, which can lead to more innovative solutions and professional growth.

What is the difference between Bioinformatics Engineering vs Bioinformatics Analyst?

AspectBioinformatics EngineeringBioinformatics Analyst
Required CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fields; programming skillsBachelor's or Master's in Bioinformatics, Biology, or related fields; data analysis skills
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, healthcare, pharmaceutical companies
Employer & Industry UsageDevelops tools, pipelines, and software for data analysisInterprets data, generates reports, supports research projects

Bioinformatics Engineering focuses on developing software and pipelines for data processing, requiring programming expertise. In contrast, Bioinformatics Analysts primarily interpret data and generate insights, often with a stronger emphasis on biological knowledge. Both roles are vital in biotech and healthcare industries, but they differ in technical scope and daily tasks.

What do bioinformatics engineers do?

Bioinformatics engineers develop and implement computational tools and algorithms to analyze biological data, such as genetic sequences and molecular structures. They often work with programming languages like Python or R, utilize databases, and collaborate with biologists to interpret data for research and medical applications.

What are popular job titles related to Bioinformatics Engineering jobs in Portland, OR?

For Bioinformatics Engineering jobs in Portland, OR, the most frequently searched job titles are:

What job categories do people searching Bioinformatics Engineering jobs in Portland, OR look for?

The top searched job categories for Bioinformatics Engineering jobs in Portland, OR are:

What cities near Portland, OR are hiring for Bioinformatics Engineering jobs?

Cities near Portland, OR with the most Bioinformatics Engineering job openings:

Infographic showing various Bioinformatics Engineering job openings in Portland, OR as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $138,982 per year, or $66.8 per hour.

Scientist II, Field Applications Bioinformatics Support

PacBio

Portland, OR โ€ข On-site

$93K - $140K/yr

Full-time

Re-posted 7 days ago


Key responsibilities

  • Assist and enable customers and collaborators to ensure successful use of PacBio data analysis software

  • Train customers on PacBio HiFi sequencing data characteristics and analysis tools, including SMRT Link software

  • Support customers pre- and post-sales by providing bioinformatics and software assistance in response to inquiries


Job description

Scientist II, Field Applications Bioinformatics Support


PacBio (NASDAQ: PACB) is a premier life science technology company that designs, develops, and manufactures advanced sequencing solutions to help scientists and clinical researchers resolve genetically complex problems. Our mission is to enable the promise of genomics to better human health. Genomics is core to all biological processes, and our advanced genomics tools provide scientists and clinical researchers the insights to better understand biology and health.


We are looking for an experienced bioinformatics support scientist with a strong customer focus to enable and support data analysis for our customers and collaborators. In this role, they will be responsible to train customers for PacBio data analysis, support customers pre- and post-sales, perform data analysis, and function as a link between customers and PacBio.


The candidate will combine bioinformatics, molecular biology, and software expertise. The ability to communicate with customers and internal teams are important aspects of this role. Our ideal candidate is a well-rounded top performer who can be a key contributor in a fast-pacing commercial environment, interacting with customers, scientists, and engineers from a wide variety of backgrounds.


Essential duties and responsibilities:

  • Assist and enable customers and collaborators to ensure successful use of PacBio data analysis software
  • Train customers on PacBio HiFi sequencing data characteristics and analysis tools, including SMRT Link software
  • Be the primary contact for customers to understand their sequencing data
  • Ensure timely bioinformatics and software assistance in response to customer inquiries
  • Support sales in conducting scientific presentations, technical discussions, and customer meetings
  • Work closely with application specialists, sales, service engineers, and technical support
  • Provide customer feedback to product marketing and software development
  • Support roll-out of new software and assist with software installations
  • Work with customers and internal teams (FAS, service engineers, tech support) to prepare new instruments installations
  • The role is field based, and up to 20% travel for onsite support and training is expected

Required Qualifications:

  • MSc/PhD in life sciences (molecular biology, biochemistry), bioinformatics, or related field
  • 2+ years' experience in bioinformatics, data management or tech support, ideally in life sciences industry
  • Well-experienced with high throughput DNA sequencing data analyses and pipelines.
  • Knowledge of state-of-the-art sequence analysis tools and workflows, such as sequence alignment, variant calling, de novo assembly, genome visualization, transcript mapping
  • Understanding of Unix systems administration, networking, and large-scale compute hardware
  • Experience with bash scripting, Python, and R
  • Excellent troubleshooting capabilities, and experience with good practice in customer support
  • Track record of conducting scientific presentations in person and virtually to internal and external audiences
  • Excellent verbal, written, and interpersonal communication skills
  • Strong time management, organizational and planning skills
  • Great cross-functional team player
  • Customer-focused mindset with the empathy to understand different levels of customers
  • Good networking and customer relationship building skills
  • Ability to work in a fast paced and growing commercial environment.
  • Valid driver's license with a clean driving record.
  • Live near an international airport

Preferred Experience:

  • Experience with PacBio data and tools
  • Experience with WDL/snakemake/nextflow
  • Previous work with CRM platforms is a plus, in particular Salesforce
  • Proven ability and motivation to work independently, i.e., in a home office-based position
  • Wet lab experience and basic knowledge of DNA sequencing instruments and library preparation protocols is a plus

Candidates must have current authorization to work in the United States without the need for present or future sponsorship.


You may be required from time to time to visit and work at PacBio locations and for such times as the Company considers necessary for the proper performance of your duties.


All listed tasks and responsibilities are deemed as essential functions to this position; however, business conditions may require reasonable accommodations for additional tasks and responsibilities.


All qualified applicants will receive consideration for employment without regard to race, sex, color, religion, national origin, protected veteran status, or on the basis of disability, gender identity, and sexual orientation.


#LI-Remote

Salary Range:

$93,400.00 - $140,000.00


To all Staffing and Recruiting Agencies: Our Careers Site is only for individuals seeking a job at PacBio. Staffing and recruiting agencies and individuals being represented by an agency are not authorized to use this site or to submit profiles, applications or resumes, and any such submissions will be considered unsolicited. PacBio does not accept unsolicited resumes or applications from agencies. Please do not forward resumes to our jobs alias, PacBio employees or any other company location. PacBio is not responsible for any fees related to unsolicited resumes/applications.


All qualified applicants will receive consideration for employment without regard to race, sex, color, religion, national origin, protected veteran status, or on the basis of disability, gender identity, and sexual orientation.

If you are an individual with a disability and require a reasonable accommodation to complete any part of the application process, or are limited in the ability or unable to access or use this online application process and need an alternative method for applying, you may contact us at 650-521-8000, or careers@pacificbiosciences.com for assistance.

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