1

Bioinformatics Engineering Jobs in Baltimore, MD

HPC Technical Lead

Silver Spring, MD · Hybrid

$211K - $286K/yr

Year's Experience: 10-12+ years of experience in HPC engineering, scientific computing, bioinformatics platforms, or advanced research infrastructure. * Technical Skills: * Strong expertise with ...

Program Manager

College Park, MD · Hybrid

$176K - $239K/yr

... bioinformatics, cloud, storage, scientific endpoints), and serves as the primary contractor ... Bachelor's degree in Computer Science, Engineering, Scientific Computing, or related field. * Year ...

Program Manager

Silver Spring, MD · On-site

$176K - $239K/yr

... bioinformatics, cloud, storage, scientific endpoints), and serves as the primary contractor ... Bachelor's degree in Computer Science, Engineering, Scientific Computing, or related field. * Year ...

Post Doc Associate

College Park, MD · On-site

$15.50 - $20.75/hr

The position consists of a high degree of numerical analysis and computer programming. The ... Apply workflows for diversity analysis, functional gene profiling, and bioinformatic pipeline ...

Post Doc Associate

College Park, MD · On-site

$15.50 - $20.75/hr

The position consists of a high degree of numerical analysis and computer programming. The ... D. in computational biology, bioinformatics or a related science field with a strong emphasis on ...

Showing results 21-40

Bioinformatics Engineering information

See Baltimore, MD salary details

$42.7K

$130.2K

$237K

How much do bioinformatics engineering jobs pay per year?

As of Aug 19, 2026, the average yearly pay for bioinformatics engineering in Baltimore, MD is $130,219.00, according to ZipRecruiter salary data. Most workers in this role earn between $95,400.00 and $156,000.00 per year, depending on experience, location, and employer.

What is a bioinformatics engineer?

A bioinformatics engineer is a professional who develops and applies computational tools and techniques to analyze and interpret biological data, such as DNA sequences or protein structures. They combine expertise in computer science, biology, and mathematics to create software, manage databases, and solve complex biological problems. Bioinformatics engineers often work in research, pharmaceuticals, healthcare, and biotechnology industries to help advance scientific discoveries and medical innovations.

What are the key skills and qualifications needed to thrive as a bioinformatics engineer?

To thrive as a Bioinformatics Engineer, you need a solid background in biology, computer science, and statistics, often supported by a degree in bioinformatics or a related field. Familiarity with programming languages like Python or R, experience with bioinformatics tools (e.g., BLAST, GATK), and proficiency with databases and cloud computing platforms are typically required. Strong problem-solving, analytical thinking, and collaboration skills set standout professionals apart in this interdisciplinary field. These competencies are crucial for effectively analyzing complex biological data and driving innovation in life sciences research.

How do bioinformatics engineers typically collaborate with biologists and data scientists in a research setting?

Bioinformatics engineers frequently work in cross-disciplinary teams, partnering closely with biologists to understand experimental goals and with data scientists to analyze complex datasets. Effective communication is key, as engineers must translate biological questions into computational workflows and interpret results in a way that is meaningful to non-technical team members. This collaborative approach not only accelerates research but also helps engineers gain a deeper understanding of biological processes, which can lead to more innovative solutions and professional growth.

What is the difference between Bioinformatics Engineering vs Bioinformatics Analyst?

AspectBioinformatics EngineeringBioinformatics Analyst
Required CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fields; programming skillsBachelor's or Master's in Bioinformatics, Biology, or related fields; data analysis skills
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, healthcare, pharmaceutical companies
Employer & Industry UsageDevelops tools, pipelines, and software for data analysisInterprets data, generates reports, supports research projects

Bioinformatics Engineering focuses on developing software and pipelines for data processing, requiring programming expertise. In contrast, Bioinformatics Analysts primarily interpret data and generate insights, often with a stronger emphasis on biological knowledge. Both roles are vital in biotech and healthcare industries, but they differ in technical scope and daily tasks.

What do bioinformatics engineers do?

Bioinformatics engineers develop and implement computational tools and algorithms to analyze biological data, such as genetic sequences and molecular structures. They often work with programming languages like Python or R, utilize databases, and collaborate with biologists to interpret data for research and medical applications.

What are popular job titles related to Bioinformatics Engineering jobs in Baltimore, MD?

For Bioinformatics Engineering jobs in Baltimore, MD, the most frequently searched job titles are:

What job categories do people searching Bioinformatics Engineering jobs in Baltimore, MD look for?

The top searched job categories for Bioinformatics Engineering jobs in Baltimore, MD are:

What cities near Baltimore, MD are hiring for Bioinformatics Engineering jobs?

Cities near Baltimore, MD with the most Bioinformatics Engineering job openings:

Infographic showing various Bioinformatics Engineering job openings in Baltimore, MD as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $130,219 per year, or $62.6 per hour.

HPC Technical Lead

GDIT

Silver Spring, MD • Hybrid

$211K - $286K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 8 days ago


General Dynamics Information Technology rating

7.8

Company rating: 7.8 out of 10

Based on 63 frontline employees who took The Breakroom Quiz

87th of 224 rated it services


Job description

Type of Requisition:

Pipeline

Clearance Level Must Currently Possess:

None

Clearance Level Must Be Able to Obtain:

None

Public Trust/Other Required:

MBI Full 5C (T3)

Job Family:

Technical Solutions

Job Qualifications:

Skills:

Customer Engagement, High Performance Computing (HPC), Networking, Technical Strategy

Certifications:

None

Experience:

10 + years of related experience

US Citizenship Required:

No

Job Description:

GDIT is seeking HPC Technical Lead to help support an upcoming contract for FDA Scientific Computing & Advanced Research Systems in Silver Spring, MD.

PLEASE NOTE:

  • Location: Hybrid onsite; occasional onsite meetings with FDA scientific stakeholders.

  • Contingency: This position is contingent upon contract award, expected to start in January 2027.


MEANINGFUL WORK AND PERSONAL IMPACT:
The High-Performance Computing (HPC) Technical Lead is the senior technical expert guiding the architecture, optimization, and evolution of Food and Drug Administration's (FDA) highperformance computing and scientific data ecosystems. This role bridges scientific research needs with advanced computing solutions, providing technical leadership across HPC clusters, parallel storage, scientific applications, cloud/HPC hybrid environments, and performance engineering. The ideal candidate combines deep handson HPC experience with the ability to advise scientists and guide modernization.

  • Serve as the senior technical authority for HPC operations, architecture, and performance optimization across compute, schedulers, networking, and storage.

  • Support scientific workloads including genomics, bioinformatics, modeling, simulation, statistical computing, and AI/ML pipelines.

  • Optimize user workloads through job sizing, code porting, compilation, parallelization, GPU acceleration, and performance tuning.

  • Lead technical strategy for scientific data storage, parallel file systems, highspeed networking, data movement, and largescale data workflows.

  • Provide guidance on futurestate HPC and hybrid cloud architectures, expansion planning, and modernization initiatives.

  • Support integration of laboratory instruments, scientific workstations, private networks, middleware, and specialized scientific software.

  • Coordinate with FDA scientists and computational users to ensure computing resources match scientific mission needs.

  • Troubleshoot complex issues across distributed compute systems, storage platforms, scientific applications, and instrumentconnected environments.

  • Prepare technical documentation, configuration guidance, and engineering recommendations.


WHAT YOU'LL NEED TO SUCCEED - REQUIRED:

  • Citizenship: US Citizen or Green Card Holder

  • Clearance: Ability to obtain a Public Trust

  • Education: Bachelor's Degree in Computer Science, Engineering, Mathematics, or related technical field.

  • Year's Experience: 10-12+ years of experience in HPC engineering, scientific computing, bioinformatics platforms, or advanced research infrastructure.

  • Technical Skills:

    • Strong expertise with Linux environments, HPC schedulers, parallel computing, GPUs, and largescale storage systems.

    • Experience optimizing scientific workloads and supporting research computing users.

    • Ability to communicate technical concepts to scientists, engineers, and program stakeholders.

DESIRED QUALIFICATIONS:

  • Education: Master's Degree or PhD in Computer Science, Engineering, Scientific Computing, or related field.

  • Technical Skills:

    • Experience with Slurm, TORQUE/Moab, GPFS, Lustre, MPI, or containerized scientific environments.

    • Experience with genomics, nextgeneration sequencing, or bioinformatics pipelines.

    • Knowledge of cloud/HPC hybrid architectures (AWS preferred).

    • Experience supporting scientific computing in federal environments.


GDIT IS YOUR PLACE:
At GDIT, the mission is our purpose, and our people are at the center of everything we do.
Growth: AI-powered career tool that identifies career steps and learning opportunities
Support: An internal mobility team focused on helping you achieve your career goals
Rewards: Comprehensive benefits and wellness packages, 401K with company match, and competitive pay and paid time off
Community: Award-winning culture of innovation and a military-friendly workplace
OWN YOUR OPPORTUNITY:
Explore a career in program management at GDIT and you'll find endless opportunities to grow alongside colleagues who share your passion for the mission and delivering results.

#GDITcareers

#OpportunityOwned

#WeAreGDIT

#transitioningmilitary

#veterans

The likely salary range for this position is $211,531 - $286,189. This is not, however, a guarantee of compensation or salary. Rather, salary will be set based on experience, geographic location and possibly contractual requirements and could fall outside of this range.

Scheduled Weekly Hours:

40

Travel Required:

50-75%

Telecommuting Options:

Hybrid

Work Location:

USA MD Silver Spring

Additional Work Locations:

Total Rewards at GDIT:

Our benefits package for all US-based employees includes a variety of medical plan options, some with Health Savings Accounts, dental plan options, a vision plan, and a 401(k) plan offering the ability to contribute both pre and post-tax dollars up to the IRS annual limits and receive a company match. To encourage work/life balance, GDIT offers employees full flex work weeks where possible and a variety of paid time off plans, including vacation, sick and personal time, holidays, paid parental, military, bereavement and jury duty leave. To ensure our employees are able to protect their income, other offerings such as short and long-term disability benefits, life, accidental death and dismemberment, personal accident, critical illness and business travel and accident insurance are provided or available. We regularly review our Total Rewards package to ensure our offerings are competitive and reflect what our employees have told us they value most.

Our Identity Verification Process:

As part of the hiring process, we will ask you to complete an identity verification process that leverages advanced biometrics and artificial intelligence to ensure authenticity and protect against identity fraud. You are expected to be on camera during virtual interviews. We reserve the right to take your picture to verify your identity and prevent fraud. By proceeding, you authorize the collection, processing, and use of your biometric data for identity verification and security purposes.

About Our Work:

We are GDIT. A global technology and professional services company that delivers technology solutions and mission services to every major agency across the U.S. government, defense and intelligence community. Our 26,000 experts extract the power of technology to create immediate value and deliver solutions at the edge of innovation. We operate across 50+ countries worldwide, offering leading mission-ready capabilities in AI, cloud, cyber and software development.Join our Talent Community to stay up to date on our career opportunities and events at

gdit.com/tc.

Equal Opportunity Employer / Individuals with Disabilities / Protected Veterans

What General Dynamics Information Technology employees say

Pay

Benefits

Hours and flexibility

Workplace

Get the full story on Breakroom


General Dynamics Information Technology logo

About General Dynamics Information Technology

Sourced by ZipRecruiter

GDIT is a global technology and professional services company that delivers technology solutions and mission services to every major agency across the U.S. government, defense, and intelligence community. Its 30,000 experts extract the power of technology to create immediate value and deliver solutions at the edge of innovation. The company operates across 50+ countries worldwide, offering leading capabilities in digital modernization, AI/ML, cloud, cyber, and application development.

Industry

It services

Company size

10,000+ Employees

Headquarters location

Falls Church, VA, US