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Bioinformatics Engineering Jobs in California (NOW HIRING)

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Bioinformatics Engineering information

What is a bioinformatics engineer?

A bioinformatics engineer is a professional who develops and applies computational tools and techniques to analyze and interpret biological data, such as DNA sequences or protein structures. They combine expertise in computer science, biology, and mathematics to create software, manage databases, and solve complex biological problems. Bioinformatics engineers often work in research, pharmaceuticals, healthcare, and biotechnology industries to help advance scientific discoveries and medical innovations.

What are the key skills and qualifications needed to thrive as a bioinformatics engineer?

To thrive as a Bioinformatics Engineer, you need a solid background in biology, computer science, and statistics, often supported by a degree in bioinformatics or a related field. Familiarity with programming languages like Python or R, experience with bioinformatics tools (e.g., BLAST, GATK), and proficiency with databases and cloud computing platforms are typically required. Strong problem-solving, analytical thinking, and collaboration skills set standout professionals apart in this interdisciplinary field. These competencies are crucial for effectively analyzing complex biological data and driving innovation in life sciences research.

How do bioinformatics engineers typically collaborate with biologists and data scientists in a research setting?

Bioinformatics engineers frequently work in cross-disciplinary teams, partnering closely with biologists to understand experimental goals and with data scientists to analyze complex datasets. Effective communication is key, as engineers must translate biological questions into computational workflows and interpret results in a way that is meaningful to non-technical team members. This collaborative approach not only accelerates research but also helps engineers gain a deeper understanding of biological processes, which can lead to more innovative solutions and professional growth.

What is the difference between Bioinformatics Engineering vs Bioinformatics Analyst?

AspectBioinformatics EngineeringBioinformatics Analyst
Required CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fields; programming skillsBachelor's or Master's in Bioinformatics, Biology, or related fields; data analysis skills
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, healthcare, pharmaceutical companies
Employer & Industry UsageDevelops tools, pipelines, and software for data analysisInterprets data, generates reports, supports research projects

Bioinformatics Engineering focuses on developing software and pipelines for data processing, requiring programming expertise. In contrast, Bioinformatics Analysts primarily interpret data and generate insights, often with a stronger emphasis on biological knowledge. Both roles are vital in biotech and healthcare industries, but they differ in technical scope and daily tasks.

What do bioinformatics engineers do?

Bioinformatics engineers develop and implement computational tools and algorithms to analyze biological data, such as genetic sequences and molecular structures. They often work with programming languages like Python or R, utilize databases, and collaborate with biologists to interpret data for research and medical applications.

What are popular job titles related to Bioinformatics Engineering jobs in California?

For Bioinformatics Engineering jobs in California, the most frequently searched job titles are:

What job categories do people searching Bioinformatics Engineering jobs in California look for?

The top searched job categories for Bioinformatics Engineering jobs in California are:

What cities in California are hiring for Bioinformatics Engineering jobs?

Cities in California with the most Bioinformatics Engineering job openings:

Bioinformatics Engineering jobs near you
Infographic showing various Bioinformatics Engineering job openings in California as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution.

Senior Bioinformatics Software Engineer

Santa Clara, CA • On-site

F. Hoffmann-La Roche Ltd
10K+ employees
Learn more about F. Hoffmann-La Roche Ltdexternal

$145K - $269K/yr

Full-time

Re-posted 16 days ago

Roche rating

9.3

Company rating: 9.3 out of 10

Based on 23 frontline employees who took The Breakroom Quiz

Job description

At Roche you can show up as yourself, embraced for the unique qualities you bring. Our culture encourages personal expression, open dialogue, and genuine connections, where you are valued, accepted and respected for who you are, allowing you to thrive both personally and professionally. This is how we aim to prevent, stop and cure diseases and ensure everyone has access to healthcare today and for generations to come. Join Roche, where every voice matters.
The Position
The Opportunity
As a Bioinformatics Software Engineer, you will design, develop, and implement features for the bioinformatics components and pipelines that are used in Roche Sequencing products. You will be part of a team working in a fast paced environment, developing cutting-edge, distributed, scale-out Next-Generation Sequencing data analysis software to ensure the highest possible software quality for gene sequencing research and disease diagnostics.
Work closely with experimental teams to understand their requirements and translate them into functional software, implementing those solutions directly within an existing research code repository. Collaborate with research and algorithm experts, accelerating bioinformatics techniques using GPU hardware. You will navigate and contribute to a large code base, applying your knowledge of advanced bioinformatics techniques (such as alignment methods and other sequence analysis algorithms) and neural nets to continuously improve the quality and feature sets of the software products.
Who You Are
  • B.S. or M.S. or PhD in Computational Biology or Bioinformatics or Biomedical engineering or related field.
  • 5+ years of experience in working with NGS data and data analysis pipelines.
  • Strong expertise in Python, including numerical computing and data science libraries, alongside familiarity with C/C++.
  • Demonstrated experience developing, maintaining, or refactoring within a large code base or existing research code repository.
  • Understanding of core bioinformatics techniques, including alignment methods, as well as neural nets.
  • Experience collaborating with experimental teams to gather requirements and implement technical solutions.
  • Thrives in a fast paced environment, showing a self-driven, detail oriented, and analytical approach with a proven ability to learn quickly.
  • Proficiency in GCP, AWS and Linux Shell environments.
  • Be a team player, customer focused with excellent interdisciplinary collaboration skills.

Preferred Qualifications
  • Practical experience utilizing GPU-accelerated C/C++ libraries or knowledge of GPUs and CUDA.
  • Experience with CI/CD tools and concepts.

Relocation benefits are not available for this posting.
The expected salary range for this position based on the primary location of California is $145,300-$269,800. Actual pay will be determined based on experience, qualifications, geographic location, and other job-related factors permitted by law. A discretionary annual bonus may be available based on individual and Company performance. This position also qualifies for the benefits detailed at the link provided below.
Benefits
Who we are
A healthier future drives us to innovate. Together, more than 100'000 employees across the globe are dedicated to advance science, ensuring everyone has access to healthcare today and for generations to come. Our efforts result in more than 26 million people treated with our medicines and over 30 billion tests conducted using our Diagnostics products. We empower each other to explore new possibilities, foster creativity, and keep our ambitions high, so we can deliver life-changing healthcare solutions that make a global impact.
Let's build a healthier future, together.
Roche is an equal opportunity employer. It is our policy and practice to employ, promote, and otherwise treat any and all employees and applicants on the basis of merit, qualifications, and competence. The company's policy prohibits unlawful discrimination, including but not limited to, discrimination on the basis of Protected Veteran status, individuals with disabilities status, and consistent with all federal, state, or local laws.
If you have a disability and need an accommodation in relation to the online application process, please contact us by completing this form Accommodations for Applicants.

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