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Bioinformatics Associate Jobs in Fremont, CA (NOW HIRING)

BillionToOne

Research Associate

Menlo Park, CA · On-site

$104K/yr

The Research Associate position at BillionToOne is exceptionally rare at the undergraduate or early ... Collaborate with other teams to implement lab and bioinformatic workflows * Contribute positively ...

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Bioinformatics Associate information

See Fremont, CA salary details

$53.6K

$222.7K

$437.9K

How much do bioinformatics associate jobs pay per year?

As of Sep 8, 2026, the average yearly pay for bioinformatics associate in Fremont, CA is $222,729.00, according to ZipRecruiter salary data. Most workers in this role earn between $85,900.00 and $437,900.00 per year, depending on experience, location, and employer.

What does a Bioinformatics Associate do?

The role of a bioinformatics associate is to perform detailed data analysis in a biology or life sciences research lab. An associate is a staff scientist or researcher, and they have significant responsibilities within the lab structure. They are responsible for conducting information support using primary research as well as developing models using a data algorithm or other analytical tools. A bioinformatics associate uses these to analyze the information and data sets collected in the lab. They may also develop a storage and archiving system so that other researchers can access data sets. Qualifications to become a bioinformatics associate typically include a master’s degree or Ph.D.

What does a Bioinformatics Associate do?

A Bioinformatics Associate is responsible for analyzing and interpreting complex biological data, often using computational tools and software. They work closely with scientists to manage and process large datasets, such as genomic sequences or protein structures. Their tasks may include developing workflows, running bioinformatics pipelines, and helping to visualize and present results. Typically, they support research projects in fields like genomics, molecular biology, and drug development. Bioinformatics Associates play a key role in translating raw biological data into actionable scientific insights.

What are the key skills and qualifications needed to thrive as a Bioinformatics Associate?

A Bioinformatics Associate requires a strong background in biology, computer science, and statistics, typically supported by a relevant bachelor's or master's degree. Familiarity with bioinformatics tools such as BLAST, Python, R, and experience with genomic databases are commonly expected, along with knowledge of data visualization platforms. Critical thinking, attention to detail, and effective communication help professionals interpret complex data and collaborate with scientific teams. These skills ensure accurate analysis, meaningful insights, and successful contributions to research projects in a rapidly evolving field.

How does a Bioinformatics Associate typically collaborate with laboratory scientists and data analysts on research projects?

Bioinformatics Associates often serve as a bridge between laboratory scientists and data analysts, translating experimental requirements into computational workflows and helping to interpret complex biological data. They regularly meet with lab teams to discuss project goals, data quality, and analysis strategies, ensuring that bioinformatics approaches align with experimental designs. Collaboration is highly iterative, involving feedback loops to refine analyses based on preliminary findings and to troubleshoot data issues, which helps drive research projects forward efficiently and accurately.
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Bioinformatics Associate jobs near you
Infographic showing various Bioinformatics Associate job openings in Fremont, CA as of August 2026, with employment types broken down into 1% As Needed, 71% Full Time, 25% Part Time, 1% Temporary, and 2% Contract. Highlights an 94% Physical, 2% Hybrid, and 4% Remote job distribution, with an average salary of $241,117 per year, or $115.9 per hour.

Bioinformatics Research Associate

SupportFinity™

Fremont, CA • On-site

$100 - $125/hr

Other

Posted 6 days ago

Job description

SeqMatic is a Next Generation Sequencing (NGS) and omics services provider based in the San Francisco South Bay Area. The company was founded in 2012 by former Illumina R&D scientists who are experts in the NGS workflow and related bioinformatics. We specialize in Illumina NGS platforms, bulk DNA/RNA‑seq, single‑cell RNA, as well as custom sequencing services with fast turnaround times. Our lab is CLIA / CAP certified. We recently expanded our capabilities beyond RUO to support clinical trials for our Clients, in addition to incorporating novel technologies such as Spatial Transcriptomics, Epigenetics, Proteomics and Histopathology.

About The Opportunity

SeqMatic is seeking a bioinformatics research associate to join our sequencing service team. The position requires a strong background in bioinformatics or a related science, particularly in analyzing NGS data.

Responsibilities
  • Data QC of NGS sequencing data
  • Bioinformatic analysis of NGS data, particularly bulk RNA and scRNA
  • Custom bioinformatic analysis
  • Develop, maintain, and optimize analysis pipelines
  • Generating data QC and analysis reports
  • Organize and maintain experimental records and lab procedures
  • Communicate in person and electronically with customers and team members
Qualification Requirements
  • B.S. or M.S. in Bioinformatics, Computational Biology, Biostatistics or a related science
  • Experience with a scripting language (Python, R, Perl, Bash, Java, JavaScript) is required
  • Experience working in a Unix/Linux command-line environment is required
  • Experience working with next-generation sequencing preferred, particularly Illumina or 10X Genomics libraries
  • Familiarity with common bioinformatics software tools for processing next-generation sequencing data, such as Bowtie, GATK/Picard, STAR, SAMtools, Cell Ranger, and/or similar applications
  • Experience working with large-scale biological datasets using high-performance computing. Familiarity with cloud computing platforms such as AWS is a plus
  • Proficient using MS Office Software
  • Ability to work well under pressure to meet deadlines
  • Ability to work independently and with a team
  • Must be detail-oriented and have strong analytical skills
Visa Sponsorship

We do not offer visa sponsorship for this position.

Pay Range

90,000 - 110,000 USD per year (Fremont Blvd)

About the Company

SeqMatic LLC.

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