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Bioinformatics Associate information

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$50.8K

$211.1K

$414.9K

How much do bioinformatics associate jobs pay per year?

As of Sep 6, 2026, the average yearly pay for bioinformatics associate in Carlsbad, CA is $211,069.00, according to ZipRecruiter salary data. Most workers in this role earn between $81,400.00 and $414,900.00 per year, depending on experience, location, and employer.

What does a Bioinformatics Associate do?

The role of a bioinformatics associate is to perform detailed data analysis in a biology or life sciences research lab. An associate is a staff scientist or researcher, and they have significant responsibilities within the lab structure. They are responsible for conducting information support using primary research as well as developing models using a data algorithm or other analytical tools. A bioinformatics associate uses these to analyze the information and data sets collected in the lab. They may also develop a storage and archiving system so that other researchers can access data sets. Qualifications to become a bioinformatics associate typically include a master’s degree or Ph.D.

What does a Bioinformatics Associate do?

A Bioinformatics Associate is responsible for analyzing and interpreting complex biological data, often using computational tools and software. They work closely with scientists to manage and process large datasets, such as genomic sequences or protein structures. Their tasks may include developing workflows, running bioinformatics pipelines, and helping to visualize and present results. Typically, they support research projects in fields like genomics, molecular biology, and drug development. Bioinformatics Associates play a key role in translating raw biological data into actionable scientific insights.

What are the key skills and qualifications needed to thrive as a Bioinformatics Associate?

A Bioinformatics Associate requires a strong background in biology, computer science, and statistics, typically supported by a relevant bachelor's or master's degree. Familiarity with bioinformatics tools such as BLAST, Python, R, and experience with genomic databases are commonly expected, along with knowledge of data visualization platforms. Critical thinking, attention to detail, and effective communication help professionals interpret complex data and collaborate with scientific teams. These skills ensure accurate analysis, meaningful insights, and successful contributions to research projects in a rapidly evolving field.

How does a Bioinformatics Associate typically collaborate with laboratory scientists and data analysts on research projects?

Bioinformatics Associates often serve as a bridge between laboratory scientists and data analysts, translating experimental requirements into computational workflows and helping to interpret complex biological data. They regularly meet with lab teams to discuss project goals, data quality, and analysis strategies, ensuring that bioinformatics approaches align with experimental designs. Collaboration is highly iterative, involving feedback loops to refine analyses based on preliminary findings and to troubleshoot data issues, which helps drive research projects forward efficiently and accurately.
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Bioinformatics Associate jobs near you
Infographic showing various Bioinformatics Associate job openings in Carlsbad, CA as of August 2026, with employment types broken down into 1% As Needed, 75% Full Time, 22% Part Time, 1% Temporary, and 1% Contract. Highlights an 96% Physical, 1% Hybrid, and 3% Remote job distribution, with an average salary of $211,069 per year, or $101.5 per hour.

Sr. Scientist, NGS and Bioinformatics Core

AlivaMab Discovery Services

San Diego, CA • On-site

Full-time

Medical, PTO

Posted 14 days ago

Job description

Overview
AlivaMab Biologics is seeking an outstanding individual to serve as the head of the NGS and Bioinformatics Core, enabling antibody discovery and engineering projects through oversight of Next-Generation Sequencing (NGS) workflows, bioinformatics, and computational analysis to thoroughly examine antibody repertoires, broadening our understanding of sequence and functional diversity and therapeutic potential of biologics. The individual will also have the opportunity and is expected to contribute to broader technology development and antibody engineering in collaboration with cross-functional teams, working closely with scientists in the Protein Sciences, Antibody Engineering, Antibody Discovery, and Project Management teams. This position will report to the Associate Director of Antibody Engineering.
Responsibilities
  • Lead the ongoing development and implementation of enhanced bioinformatics pipelines and computational workflows for the analysis of antibody sequences and immune repertoires from NGS and other data sources
  • Apply and advance AI/ML approaches for antibody sequence analyses and sequence-epitope prediction
  • Manage and continuously improve the end-to-end NGS workflow (library generation, sequencing on Illumina MiSeq, QC, and downstream analysis), directing execution and safeguarding data quality
  • Ideate, propose, and lead new technology initiatives to expand sequencing capabilities, data infrastructure, and analytical tools
  • Serve as the primary subject matter expert in bioinformatics, computational analysis, and NGS, educating and supporting cross-functional teams on data interpretation and best practices
  • Maintain awareness of major announcements in the field and provide critical analyses of strengths and weaknesses of such claims to senior management
  • Collaborate with project leads on sequencing and computational analyses reports
  • Serve as a subject matter expert for the team in interactions with external partners, presenting sequencing data, interpreting results, and addressing partner questions with clarity and confidence
  • Operate with a high degree of scientific independence while maintaining proactive, open communication with stakeholders
  • Generate, organize, and maintain meticulous records using Electronic Lab Notebooks and generate SOPs

Qualifications
Key Skills and Requirements:
  • Ph.D. in Molecular Biology, Biochemistry, Bioinformatics, Computational Biology, or related Life Sciences
  • Minimally, 5+ years of experience in biotech/pharma or an academic setting with a strong focus on bioinformatics, computational biology, and/or NGS data analysis
  • Proficiency in bioinformatics with hands-on experience applying NGS data analysis tools to antibody sequencing and immune repertoire workflows
  • Proficient Python coding skills with experience in developing or customizing bioinformatics workflows for antibody sequencing and immune repertoire analysis
  • Demonstrated experience applying AI/ML methods to antibody or protein sequence and structure data (e.g., sequence-epitope prediction, structure modeling)
  • Understanding of the biology of the human immune repertoire and immunoglobulin genes
  • Demonstrated initiative, insightfulness, and creativity in applications of AI/ML for analyses of antibody sequences and/or immune repertoires
  • Knowledge and hands-on experience in NGS library preparation, sequencing platforms, and QC methodologies
  • Experience with single-cell sequencing workflows, such as 10X Genomics, is a plus
  • Experience with the applications of ML/AI to antibody drug discovery and development is a plus.
  • Excellent troubleshooting, problem-solving, and analytical skills
  • Meticulous attention to detail, planning, and organizational skills with a history of timeline-driven delivery
  • Excellent communicator, highly effective in interacting with key internal and external stakeholders
  • Team player and collaborative leader, with strong coaching and mentoring skills
  • High functioning in an environment dedicated to exceptional quality and integrity

About AlivaMab Biologics
AlivaMab Biologics sets its partners' antibody discovery programs on the fastest and most de-risked path through discovery and development. Trusted by top-tier pharmaceutical and biotechnology companies, AMB delivers drug-quality, fully human antibodies on exceptional timelines. AMB achieves its partners' design goals, from simple to extraordinarily challenging, through the generation and function-first screening of large, molecularly diverse panels of antibodies. AMB focuses on the rapid and efficient delivery of antibodies, characterized for function, kinetics, and developability, and on engineering alternative formats, including multispecifics and CARs. The AMB team's experience and passion for antibody drug discovery and development, combined with trusted, proven technologies, including Ablexis' AlivaMab® Mouse platforms, ensure the highest probability of success.
AlivaMab Biologics provides equal employment opportunities (EEO) to all employees and applicants for employment without regard to race, color, religion or creed, sex, sexual orientation, gender, gender identity or expression, pregnancy, childbirth or related medical conditions, reproductive health decision-making, national origin, ancestry, age, physical or mental disability, medical condition, genetic information, marital status, citizenship or immigration status, veteran or military status, or any other characteristic protected by applicable federal, state, or local law.
Salary Range: $144,000 - $176,000 annually
This range represents AlivaMab Biologics' good-faith estimate of the base compensation for this position at the time of posting. Compensation offered will account for factors such as experience, education, and comprehensiveness of qualifications. The salary range excludes bonuses, equity, health benefits, PTO, other benefits, or any other forms of compensation that may be part of the total compensation package. Relocation assistance may be considered.
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