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Bioinformatic Engineer Jobs in Colorado (NOW HIRING)

We sit at the intersection of molecular biology, bioinformatics, and next-generation sequencing ... Identify, document, and track software defects; collaborate with engineering teams to troubleshoot ...

We sit at the intersection of molecular biology, bioinformatics, and next-generation sequencing ... Identify, document, and track software defects; collaborate with engineering teams to troubleshoot ...

Data Analyst

Boulder, CO · On-site

$100K - $150K/yr

Bachelor's or Master's in Statistics, Biostatistics, Chemical Engineering, Bioinformatics, Cheminformatics, or related fields with 5-8 years of experience, or a PhD with 3-5 years of experience.

Data Analyst

Boulder, CO · On-site

$100K - $150K/yr

Bachelor's or Master's in Statistics, Biostatistics, Chemical Engineering, Bioinformatics, Cheminformatics, or related fields with 5-8 years of experience, or a PhD with 3-5 years of experience.

Data Analyst

Boulder, CO · On-site

$100K - $150K/yr

Bachelor's or Master's in Statistics, Biostatistics, Chemical Engineering, Bioinformatics, Cheminformatics, or related fields with 5-8 years of experience, or a PhD with 3-5 years of experience.

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Bioinformatic Engineer information

See Colorado salary details

$34.7K

$93.8K

$149.3K

How much do bioinformatic engineer jobs pay per year?

As of Sep 10, 2026, the average yearly pay for bioinformatic engineer in Colorado is $93,778.00, according to ZipRecruiter salary data. Most workers in this role earn between $69,900.00 and $114,600.00 per year, depending on experience, location, and employer.

What is a bioinformatic engineer?

Bioinformatic Engineers are professionals who develop and apply computational tools and techniques to analyze biological data, such as DNA sequences, protein structures, and genetic information. They combine expertise in computer science, biology, and mathematics to process large datasets generated by modern biological experiments. Their work supports research in areas like genomics, drug discovery, and personalized medicine by helping scientists make sense of complex biological data.

What skills and qualifications are needed to thrive as a bioinformatic engineer?

To thrive as a Bioinformatic Engineer, you need a strong background in computational biology, programming (such as Python or R), statistics, and a relevant degree in bioinformatics, computer science, or a related field. Familiarity with bioinformatics tools (like BLAST, GATK, or Bioconductor), data analysis platforms, and experience with databases such as SQL are typically required. Strong problem-solving abilities, attention to detail, and effective communication skills help you interpret complex data and collaborate with multidisciplinary teams. These skills are essential for accurately analyzing biological data, deriving meaningful insights, and facilitating research or clinical advancements.

What are common challenges faced by bioinformatic engineers when working with large-scale genomic data?

Bioinformatic Engineers often encounter challenges related to managing and processing vast amounts of genomic data, which can require significant computational resources and efficient data handling strategies. Ensuring data integrity, reproducibility of analyses, and effective collaboration with multidisciplinary teams of biologists, statisticians, and software developers are also key aspects of the role. Staying updated with the latest bioinformatics tools and pipelines is essential, as the field evolves rapidly. Overcoming these challenges requires strong problem-solving skills, attention to detail, and the ability to communicate complex findings to non-technical stakeholders.

What is the difference between Bioinformatic Engineer vs Bioinformatics Analyst?

AspectBioinformatic EngineerBioinformatics Analyst
Required CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fieldsBachelor's or Master's in Bioinformatics, Biology, or related fields
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, healthcare, pharmaceutical companies
Employer & Industry UsageDevelops tools, pipelines, and software for biological data analysisAnalyzes biological data, interprets results, and reports findings

While both roles involve biological data, Bioinformatic Engineers focus on developing computational tools and pipelines, whereas Bioinformatics Analysts primarily interpret data and generate insights. Both positions require similar educational backgrounds and are vital in research and healthcare settings, but their core responsibilities differ in development versus analysis.

What are popular job titles related to Bioinformatic Engineer jobs in Colorado?

For Bioinformatic Engineer jobs in Colorado, the most frequently searched job titles are:

What job categories do people searching Bioinformatic Engineer jobs in Colorado look for?

The top searched job categories for Bioinformatic Engineer jobs in Colorado are:

Infographic showing various Bioinformatic Engineer job openings in Colorado as of September 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $93,778 per year, or $45.1 per hour.

Software Test Engineer

Boulder, CO • On-site

Natera
Biotechnology Research and Development • 1 - 5K employees

Full-time

Medical, Dental, Vision, Retirement, PTO

Re-posted 17 days ago


Natera rating

7.8

Company rating: 7.8 out of 10

Based on 39 frontline employees who took The Breakroom Quiz

56th of 121 rated laboratories


Job description

Work Schedule: Monday - Friday (with flexibility to meet operational needs), on-site or hybrid (minimum 2d per week onsite)

Location: On-Site in Boulder, CO (Foresight Dx business unit, a Natera company)

Foresight Diagnostics is a molecular diagnostics company pioneering non-invasive cancer detection through highly sensitive, cell-free DNA-based liquid biopsy technologies. Our proprietary methods - originally developed at Stanford University - are designed to detect smaller tumors earlier and enable more personalized treatment strategies for patients with cancer. 

We sit at the intersection of molecular biology, bioinformatics, and next-generation sequencing (NGS), and we translate rigorous science into clinically meaningful solutions. Following our acquisition by Natera, we now combine the agility of a mission-driven startup with the scale and resources of a global leader in cell-free DNA testing. It's an exciting moment to join us. 

Headquartered in Boulder, Colorado, our team operates in a high accountability, collaborative environment where quality and continuous improvement aren't just values - they're how we work every day.

What You Will Do: 

  • Design, develop, and execute test cases based on software requirements, functional specifications, and user needs for laboratory systems

  • Perform manual and/or automated testing to validate software functionality, data integrity, and workflow performance in a CLIA-regulated environment

  • Partner closely with laboratory operations teams to understand end-to-end workflows and translate them into effective test scenarios

  • Identify, document, and track software defects; collaborate with engineering teams to troubleshoot and resolve issues

  • Support validation and verification activities for new software releases, system upgrades, and process changes in accordance with CLIA, CAP, NYSDOH, and internal quality standards

  • Ensure traceability between requirements, test cases, and validation documentation

  • Participate in risk assessments and impact analyses related to software changes affecting laboratory operations

  • Contribute to the development and continuous improvement of software testing strategies, SOPs, and documentation practices

  • Support audits and inspections by maintaining clear, thorough, and compliant testing documentation

  • Act as a quality advocate, ensuring software supports accurate, reliable, and timely patient testing results

  • Partner with Operational Excellence to align test strategies with process design, workflow optimization, and scalability initiatives.

  • Provide input into system requirements and user stories based on laboratory workflow expertise and testing insights.

  • Support critical feedback loops to ensure continuous improvements to software systems.

  • Support change management efforts by assessing downstream operational impact of software releases and enhancements.

What You Will Bring:

Minimum Requirements:

  • Bachelor's degree in a scientific discipline (e.g., Biology, Molecular Biology, Bioinformatics) or related field, or equivalent experience

  • 2+ years of experience in software testing, quality assurance, or validation, preferably in a regulated environment

  • Familiarity with NGS workflows and/or clinical laboratory operations (CLIA, CAP, or equivalent)

  • Experience writing and executing test cases based on requirements and specifications

  • Strong attention to detail and ability to identify edge cases and failure modes

  • Excellent documentation skills with a focus on clarity, completeness, and compliance

  • Demonstrated ability to translate complex operational workflows into structured test scenarios and validation strategies.

 Preferred Qualifications:

  • Experience testing LIMS, LIS, or other laboratory software systems

  • Knowledge of software development lifecycle (SDLC) and validation frameworks (e.g., CSV, GxP)

  • Experience working in high-complexity molecular diagnostics or MRD testing environments

  • Familiarity with data validation, NGS file formats (e.g., FASTQ, BAM, VCF), and/or bioinformatics pipelines

  • Exposure to test automation tools or scripting (e.g., Python, SQL)

  • Experience working cross-functionally with engineering, bioinformatics, and quality teams

  • Exposure to regulated change control processes and software impact assessments in regulated environments.

Key Competencies

  • Quality Mindset: Operates with a strong understanding of regulated environments and the importance of compliance, accuracy, and reproducibility

  • Attention to Detail: Able to rigorously evaluate software behavior and identify subtle defects or inconsistencies

  • Problem Solving: Approaches issues methodically, with a focus on root cause analysis and practical solutions

  • Systems Thinking: Understands how software, workflows, and laboratory operations interconnect and impact one another across the full testing lifecycle.

  • Operational Acumen: Demonstrates awareness of real-world laboratory constraints, throughput considerations, and process dependencies.

  • Collaboration: Works effectively across technical and non-technical teams to drive outcomes

  • Adaptability: Thrives in a fast-paced, evolving environment with shifting priorities

Compensation & Total Rewards 

This range reflects a good-faith estimate of the base pay we reasonably expect to offer at the time of hire. Final compensation will vary based on experience, qualifications, and internal equity considerations.

This position is also eligible for additional compensation and benefits through Natera's robust Total Rewards program, including:

  • Annual performance incentive bonus
  • Long-term equity awards
  • Comprehensive health benefits (medical, dental, vision)
  • 401(k) with company match
  • Generous paid time off and company holidays
  • Additional wellness and work-life benefits

Compensation Range

$111,600.00 - $125,000.00   


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