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Bioinformatics SME I

Bristol Bay Shared Services (BBSS), LLC
Atlanta, GA
  • Posted: August 19, 2022
  • Full-Time

Eagle Global Scientific (EGS) is seeking a Bioinformatics SME to provide the following:

  • Develop standard operating procedures and quality documentation for sequence analysis pipelines
  • Provide technical assistance on a variety of tasks and assignments related to genomic epidemiologic studies on the evolution of viruses
  • Apply analytical and interpretive skills to analyze next generation sequence data from global surveillance of viruses
  • Provide data management and analytic support for global surveillance platforms
  • Genome assembly of next generation sequencing from Illumina required, PacBio and Minion (all three preferred)
  • Experience with Integrative Genomics Viewer (IGV) and samstools
  • Experience with Linux, command-line interfaces, and automation via Shell scripting
  • Experience in programming (R, Python, Perl, etc.), version control (GIT) & best practices
  • Understanding of data management fundamentals (SQL, relational model, OLAP)
  • Knowledge of workflow management tools (Snakemake, Nextflow) a big plus
  • Familiarity with business intelligence tools (Tableau, PowerBI)
  • Exposure and literacy with distributed and parallel computing (Spark, Hadoop, AWS (Amazon web service), Grid Engine / HPC (High Performance Computing)) is greatly preferred
Qualifications: Bachelor's or Master's degree in Bioinformatics, Computational Biology, Computer Science, Mathematics, or related field; 3-5 years relevant work experience.

Other details
  • Pay Type Salary

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Bristol Bay Shared Services (BBSS), LLC


Atlanta, GA



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